Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDC42SE1Q9NRR8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC42SE1Q9NRR8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE1Q9NRR8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE1Q9NRR8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC14.65□□□□□ -0.06
CDC42SE1Q9NRR8 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE1Q9NRR8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDC42SE1Q9NRR8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC42SE1Q9NRR8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE1Q9NRR8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDC42SE1Q9NRR8 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDC42SE1Q9NRR8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDC42SE1Q9NRR8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CDC42SE1Q9NRR8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE1Q9NRR8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDC42SE1Q9NRR8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CDC42SE1Q9NRR8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDC42SE1Q9NRR8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDC42SE1Q9NRR8 ABCB10P3-201ENST00000561950 2166 ntBASIC14.59□□□□□ -0.07
CDC42SE1Q9NRR8 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE1Q9NRR8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CDC42SE1Q9NRR8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CDC42SE1Q9NRR8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE1Q9NRR8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CDC42SE1Q9NRR8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE1Q9NRR8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDC42SE1Q9NRR8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE1Q9NRR8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE1Q9NRR8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDC42SE1Q9NRR8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.54□□□□□ -0.08
CDC42SE1Q9NRR8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDC42SE1Q9NRR8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDC42SE1Q9NRR8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CDC42SE1Q9NRR8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC42SE1Q9NRR8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDC42SE1Q9NRR8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE1Q9NRR8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC42SE1Q9NRR8 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDC42SE1Q9NRR8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC42SE1Q9NRR8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC42SE1Q9NRR8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDC42SE1Q9NRR8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE1Q9NRR8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE1Q9NRR8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDC42SE1Q9NRR8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42SE1Q9NRR8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42SE1Q9NRR8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDC42SE1Q9NRR8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDC42SE1Q9NRR8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC14.47□□□□□ -0.09
CDC42SE1Q9NRR8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CDC42SE1Q9NRR8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDC42SE1Q9NRR8 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC14.47□□□□□ -0.09
CDC42SE1Q9NRR8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CDC42SE1Q9NRR8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDC42SE1Q9NRR8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CDC42SE1Q9NRR8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
CDC42SE1Q9NRR8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDC42SE1Q9NRR8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CDC42SE1Q9NRR8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE1Q9NRR8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDC42SE1Q9NRR8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE1Q9NRR8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE1Q9NRR8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDC42SE1Q9NRR8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE1Q9NRR8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE1Q9NRR8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE1Q9NRR8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE1Q9NRR8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDC42SE1Q9NRR8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE1Q9NRR8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDC42SE1Q9NRR8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE1Q9NRR8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDC42SE1Q9NRR8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE1Q9NRR8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDC42SE1Q9NRR8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.38□□□□□ -0.11
CDC42SE1Q9NRR8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDC42SE1Q9NRR8 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDC42SE1Q9NRR8 ABCB10P1-201ENST00000614297 2181 ntBASIC14.37□□□□□ -0.11
CDC42SE1Q9NRR8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE1Q9NRR8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE1Q9NRR8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE1Q9NRR8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC42SE1Q9NRR8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC42SE1Q9NRR8 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE1Q9NRR8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC42SE1Q9NRR8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE1Q9NRR8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC42SE1Q9NRR8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC42SE1Q9NRR8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.35□□□□□ -0.11
CDC42SE1Q9NRR8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE1Q9NRR8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDC42SE1Q9NRR8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDC42SE1Q9NRR8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.33□□□□□ -0.12
CDC42SE1Q9NRR8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms