Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
SLC6A18Q96N87 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.88■■■□□ 2.05
SLC6A18Q96N87 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
SLC6A18Q96N87 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
SLC6A18Q96N87 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
SLC6A18Q96N87 AL133380.1-201ENST00000506013 324 ntBASIC27.82■■■□□ 2.04
SLC6A18Q96N87 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
SLC6A18Q96N87 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.81■■■□□ 2.04
SLC6A18Q96N87 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SLC6A18Q96N87 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SLC6A18Q96N87 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
SLC6A18Q96N87 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.77■■■□□ 2.04
SLC6A18Q96N87 AL391121.1-201ENST00000607967 1349 ntBASIC27.77■■■□□ 2.04
SLC6A18Q96N87 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SLC6A18Q96N87 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SLC6A18Q96N87 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SLC6A18Q96N87 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SLC6A18Q96N87 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.75■■■□□ 2.03
SLC6A18Q96N87 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC27.72■■■□□ 2.03
SLC6A18Q96N87 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
SLC6A18Q96N87 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.68■■■□□ 2.02
SLC6A18Q96N87 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.68■■■□□ 2.02
SLC6A18Q96N87 AL162393.1-201ENST00000437852 946 ntBASIC27.66■■■□□ 2.02
SLC6A18Q96N87 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.66■■■□□ 2.02
SLC6A18Q96N87 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
SLC6A18Q96N87 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.02
SLC6A18Q96N87 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
SLC6A18Q96N87 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SLC6A18Q96N87 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.62■■■□□ 2.01
SLC6A18Q96N87 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.61■■■□□ 2.01
SLC6A18Q96N87 EBPL-202ENST00000378268 680 ntTSL 3 BASIC27.59■■■□□ 2.01
SLC6A18Q96N87 AP006261.1-201ENST00000584783 668 ntBASIC27.59■■■□□ 2.01
SLC6A18Q96N87 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
SLC6A18Q96N87 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SLC6A18Q96N87 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC27.57■■■□□ 2
SLC6A18Q96N87 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.56■■■□□ 2
SLC6A18Q96N87 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC27.56■■■□□ 2
SLC6A18Q96N87 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.55■■■□□ 2
SLC6A18Q96N87 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SLC6A18Q96N87 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
SLC6A18Q96N87 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SLC6A18Q96N87 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.54■■■□□ 2
SLC6A18Q96N87 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.53■■■□□ 2
SLC6A18Q96N87 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.53■■■□□ 2
SLC6A18Q96N87 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.53■■■□□ 2
SLC6A18Q96N87 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
SLC6A18Q96N87 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.52■■■□□ 2
SLC6A18Q96N87 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.51■■□□□ 1.99
SLC6A18Q96N87 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
SLC6A18Q96N87 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC27.49■■□□□ 1.99
SLC6A18Q96N87 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SLC6A18Q96N87 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SLC6A18Q96N87 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SLC6A18Q96N87 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
SLC6A18Q96N87 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
SLC6A18Q96N87 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
SLC6A18Q96N87 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.4■■□□□ 1.98
SLC6A18Q96N87 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SLC6A18Q96N87 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.38■■□□□ 1.97
SLC6A18Q96N87 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
SLC6A18Q96N87 MIR3665-201ENST00000578708 105 ntBASIC27.38■■□□□ 1.97
SLC6A18Q96N87 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SLC6A18Q96N87 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC27.34■■□□□ 1.97
SLC6A18Q96N87 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 MIR762-201ENST00000390236 83 ntBASIC27.33■■□□□ 1.97
SLC6A18Q96N87 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 DUX4L28-201ENST00000623687 678 ntBASIC27.33■■□□□ 1.97
SLC6A18Q96N87 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SLC6A18Q96N87 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.32■■□□□ 1.96
SLC6A18Q96N87 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.31■■□□□ 1.96
SLC6A18Q96N87 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SLC6A18Q96N87 AC087741.3-201ENST00000624270 1347 ntBASIC27.28■■□□□ 1.96
SLC6A18Q96N87 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.28■■□□□ 1.96
SLC6A18Q96N87 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
SLC6A18Q96N87 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SLC6A18Q96N87 AC005559.1-201ENST00000589661 871 ntBASIC27.24■■□□□ 1.95
SLC6A18Q96N87 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SLC6A18Q96N87 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.23■■□□□ 1.95
SLC6A18Q96N87 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SLC6A18Q96N87 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
SLC6A18Q96N87 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SLC6A18Q96N87 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.22■■□□□ 1.95
SLC6A18Q96N87 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SLC6A18Q96N87 DENR-202ENST00000455982 1052 ntTSL 5 BASIC27.19■■□□□ 1.94
SLC6A18Q96N87 WASH5P-204ENST00000632292 975 ntBASIC27.19■■□□□ 1.94
SLC6A18Q96N87 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SLC6A18Q96N87 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC6A18Q96N87 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
SLC6A18Q96N87 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC6A18Q96N87 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SLC6A18Q96N87 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
SLC6A18Q96N87 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC6A18Q96N87 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms