Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
COL22A1Q8NFW1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
COL22A1Q8NFW1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
COL22A1Q8NFW1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC38.89■■■■□ 3.82
COL22A1Q8NFW1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
COL22A1Q8NFW1 ABHD17AP4-201ENST00000411545 909 ntBASIC38.88■■■■□ 3.81
COL22A1Q8NFW1 AC145285.7-201ENST00000614819 1539 ntBASIC38.87■■■■□ 3.81
COL22A1Q8NFW1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
COL22A1Q8NFW1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC38.85■■■■□ 3.81
COL22A1Q8NFW1 HLA-V-202ENST00000446817 847 ntBASIC38.81■■■■□ 3.8
COL22A1Q8NFW1 MIR3665-201ENST00000578708 105 ntBASIC38.81■■■■□ 3.8
COL22A1Q8NFW1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.78■■■■□ 3.8
COL22A1Q8NFW1 DUX4L28-201ENST00000623687 678 ntBASIC38.78■■■■□ 3.8
COL22A1Q8NFW1 AC087741.3-201ENST00000624270 1347 ntBASIC38.78■■■■□ 3.8
COL22A1Q8NFW1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC38.78■■■■□ 3.8
COL22A1Q8NFW1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC38.76■■■■□ 3.8
COL22A1Q8NFW1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC38.76■■■■□ 3.8
COL22A1Q8NFW1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC38.75■■■■□ 3.79
COL22A1Q8NFW1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC38.74■■■■□ 3.79
COL22A1Q8NFW1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC38.73■■■■□ 3.79
COL22A1Q8NFW1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
COL22A1Q8NFW1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
COL22A1Q8NFW1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC38.7■■■■□ 3.79
COL22A1Q8NFW1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC38.68■■■■□ 3.78
COL22A1Q8NFW1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC38.65■■■■□ 3.78
COL22A1Q8NFW1 AC044849.2-201ENST00000606596 710 ntBASIC38.65■■■■□ 3.78
COL22A1Q8NFW1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC38.64■■■■□ 3.78
COL22A1Q8NFW1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC38.63■■■■□ 3.78
COL22A1Q8NFW1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC38.63■■■■□ 3.77
COL22A1Q8NFW1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
COL22A1Q8NFW1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC38.6■■■■□ 3.77
COL22A1Q8NFW1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
COL22A1Q8NFW1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC38.58■■■■□ 3.77
COL22A1Q8NFW1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.57■■■■□ 3.76
COL22A1Q8NFW1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC38.54■■■■□ 3.76
COL22A1Q8NFW1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC38.52■■■■□ 3.76
COL22A1Q8NFW1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC38.52■■■■□ 3.76
COL22A1Q8NFW1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC38.51■■■■□ 3.76
COL22A1Q8NFW1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC38.49■■■■□ 3.75
COL22A1Q8NFW1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.47■■■■□ 3.75
COL22A1Q8NFW1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC38.46■■■■□ 3.75
COL22A1Q8NFW1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC38.42■■■■□ 3.74
COL22A1Q8NFW1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC38.41■■■■□ 3.74
COL22A1Q8NFW1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
COL22A1Q8NFW1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC38.4■■■■□ 3.74
COL22A1Q8NFW1 AC005559.1-201ENST00000589661 871 ntBASIC38.39■■■■□ 3.74
COL22A1Q8NFW1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC38.38■■■■□ 3.74
COL22A1Q8NFW1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC38.38■■■■□ 3.74
COL22A1Q8NFW1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC38.38■■■■□ 3.73
COL22A1Q8NFW1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
COL22A1Q8NFW1 CHML-205ENST00000638160 705 ntTSL 3 BASIC38.37■■■■□ 3.73
COL22A1Q8NFW1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
COL22A1Q8NFW1 MIR762-201ENST00000390236 83 ntBASIC38.36■■■■□ 3.73
COL22A1Q8NFW1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC38.36■■■■□ 3.73
COL22A1Q8NFW1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
COL22A1Q8NFW1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC38.34■■■■□ 3.73
COL22A1Q8NFW1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC38.33■■■■□ 3.73
COL22A1Q8NFW1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC38.29■■■■□ 3.72
COL22A1Q8NFW1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC38.29■■■■□ 3.72
COL22A1Q8NFW1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC38.27■■■■□ 3.72
COL22A1Q8NFW1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC38.26■■■■□ 3.72
COL22A1Q8NFW1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC38.25■■■■□ 3.71
COL22A1Q8NFW1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC38.24■■■■□ 3.71
COL22A1Q8NFW1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
COL22A1Q8NFW1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC38.22■■■■□ 3.71
COL22A1Q8NFW1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC38.2■■■■□ 3.71
COL22A1Q8NFW1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC38.2■■■■□ 3.7
COL22A1Q8NFW1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.17■■■■□ 3.7
COL22A1Q8NFW1 ZNRF2P2-203ENST00000454624 420 ntBASIC38.16■■■■□ 3.7
COL22A1Q8NFW1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC38.14■■■■□ 3.7
COL22A1Q8NFW1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
COL22A1Q8NFW1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC38.13■■■■□ 3.69
COL22A1Q8NFW1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC38.13■■■■□ 3.69
COL22A1Q8NFW1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC38.12■■■■□ 3.69
COL22A1Q8NFW1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC38.12■■■■□ 3.69
COL22A1Q8NFW1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
COL22A1Q8NFW1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
COL22A1Q8NFW1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC38.09■■■■□ 3.69
COL22A1Q8NFW1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
COL22A1Q8NFW1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC38.09■■■■□ 3.69
COL22A1Q8NFW1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
COL22A1Q8NFW1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC38.08■■■■□ 3.69
COL22A1Q8NFW1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
COL22A1Q8NFW1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC38.07■■■■□ 3.68
COL22A1Q8NFW1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC38.05■■■■□ 3.68
COL22A1Q8NFW1 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC38.04■■■■□ 3.68
COL22A1Q8NFW1 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
COL22A1Q8NFW1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC38.01■■■■□ 3.68
COL22A1Q8NFW1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC38.01■■■■□ 3.68
COL22A1Q8NFW1 MIR4449-201ENST00000578365 66 ntBASIC38.01■■■■□ 3.68
COL22A1Q8NFW1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC37.99■■■■□ 3.67
COL22A1Q8NFW1 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC37.94■■■■□ 3.66
COL22A1Q8NFW1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC37.92■■■■□ 3.66
COL22A1Q8NFW1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC37.91■■■■□ 3.66
COL22A1Q8NFW1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
COL22A1Q8NFW1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC37.89■■■■□ 3.66
COL22A1Q8NFW1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC37.88■■■■□ 3.66
COL22A1Q8NFW1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC37.87■■■■□ 3.65
COL22A1Q8NFW1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC37.86■■■■□ 3.65
COL22A1Q8NFW1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC37.86■■■■□ 3.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms