Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 MIR3665-201ENST00000578708 105 ntBASIC22.27■■□□□ 1.16
C3orf56Q8N813 HLA-V-202ENST00000446817 847 ntBASIC22.26■■□□□ 1.15
C3orf56Q8N813 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.25■■□□□ 1.15
C3orf56Q8N813 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
C3orf56Q8N813 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C3orf56Q8N813 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.21■■□□□ 1.15
C3orf56Q8N813 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.2■■□□□ 1.14
C3orf56Q8N813 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
C3orf56Q8N813 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
C3orf56Q8N813 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
C3orf56Q8N813 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.18■■□□□ 1.14
C3orf56Q8N813 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
C3orf56Q8N813 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC22.17■■□□□ 1.14
C3orf56Q8N813 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
C3orf56Q8N813 ILK-212ENST00000532063 1617 ntTSL 2 BASIC22.14■■□□□ 1.14
C3orf56Q8N813 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.14■■□□□ 1.13
C3orf56Q8N813 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.12■■□□□ 1.13
C3orf56Q8N813 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.11■■□□□ 1.13
C3orf56Q8N813 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
C3orf56Q8N813 AL133380.1-201ENST00000506013 324 ntBASIC22.11■■□□□ 1.13
C3orf56Q8N813 AC044849.2-201ENST00000606596 710 ntBASIC22.11■■□□□ 1.13
C3orf56Q8N813 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
C3orf56Q8N813 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.1■■□□□ 1.13
C3orf56Q8N813 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.09■■□□□ 1.13
C3orf56Q8N813 AC087741.3-201ENST00000624270 1347 ntBASIC22.09■■□□□ 1.13
C3orf56Q8N813 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
C3orf56Q8N813 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
C3orf56Q8N813 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
C3orf56Q8N813 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
C3orf56Q8N813 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
C3orf56Q8N813 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
C3orf56Q8N813 AC145285.7-201ENST00000614819 1539 ntBASIC22.04■■□□□ 1.12
C3orf56Q8N813 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
C3orf56Q8N813 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.02■■□□□ 1.12
C3orf56Q8N813 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.01■■□□□ 1.11
C3orf56Q8N813 DUX4L28-201ENST00000623687 678 ntBASIC22.01■■□□□ 1.11
C3orf56Q8N813 CHML-205ENST00000638160 705 ntTSL 3 BASIC22■■□□□ 1.11
C3orf56Q8N813 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.99■■□□□ 1.11
C3orf56Q8N813 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
C3orf56Q8N813 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
C3orf56Q8N813 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
C3orf56Q8N813 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
C3orf56Q8N813 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.98■■□□□ 1.11
C3orf56Q8N813 AC005559.1-201ENST00000589661 871 ntBASIC21.97■■□□□ 1.11
C3orf56Q8N813 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.96■■□□□ 1.11
C3orf56Q8N813 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
C3orf56Q8N813 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.96■■□□□ 1.11
C3orf56Q8N813 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.96■■□□□ 1.11
C3orf56Q8N813 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.96■■□□□ 1.11
C3orf56Q8N813 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
C3orf56Q8N813 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
C3orf56Q8N813 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
C3orf56Q8N813 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.94■■□□□ 1.1
C3orf56Q8N813 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
C3orf56Q8N813 MIR762-201ENST00000390236 83 ntBASIC21.93■■□□□ 1.1
C3orf56Q8N813 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.92■■□□□ 1.1
C3orf56Q8N813 ZNRF2P2-203ENST00000454624 420 ntBASIC21.92■■□□□ 1.1
C3orf56Q8N813 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.91■■□□□ 1.1
C3orf56Q8N813 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
C3orf56Q8N813 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.9■■□□□ 1.1
C3orf56Q8N813 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.9■■□□□ 1.1
C3orf56Q8N813 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC21.87■■□□□ 1.09
C3orf56Q8N813 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
C3orf56Q8N813 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.85■■□□□ 1.09
C3orf56Q8N813 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.85■■□□□ 1.09
C3orf56Q8N813 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.83■■□□□ 1.09
C3orf56Q8N813 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
C3orf56Q8N813 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
C3orf56Q8N813 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
C3orf56Q8N813 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.81■■□□□ 1.08
C3orf56Q8N813 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf56Q8N813 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf56Q8N813 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf56Q8N813 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
C3orf56Q8N813 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.79■■□□□ 1.08
C3orf56Q8N813 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
C3orf56Q8N813 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C3orf56Q8N813 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
C3orf56Q8N813 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
C3orf56Q8N813 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
C3orf56Q8N813 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
C3orf56Q8N813 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C3orf56Q8N813 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
C3orf56Q8N813 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.72■■□□□ 1.07
C3orf56Q8N813 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
C3orf56Q8N813 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.71■■□□□ 1.07
C3orf56Q8N813 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
C3orf56Q8N813 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
C3orf56Q8N813 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
C3orf56Q8N813 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C3orf56Q8N813 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
C3orf56Q8N813 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
C3orf56Q8N813 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.67■■□□□ 1.06
C3orf56Q8N813 MIR4449-201ENST00000578365 66 ntBASIC21.67■■□□□ 1.06
C3orf56Q8N813 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
C3orf56Q8N813 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
C3orf56Q8N813 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.65■■□□□ 1.06
C3orf56Q8N813 DUX4L29-201ENST00000425409 679 ntBASIC21.65■■□□□ 1.06
C3orf56Q8N813 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.65■■□□□ 1.06
C3orf56Q8N813 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms