Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.05■■□□□ 1.92
COL27A1Q8IZC6 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.05■■□□□ 1.92
COL27A1Q8IZC6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL27A1Q8IZC6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL27A1Q8IZC6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL27A1Q8IZC6 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
COL27A1Q8IZC6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.96■■□□□ 1.91
COL27A1Q8IZC6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
COL27A1Q8IZC6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL27A1Q8IZC6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
COL27A1Q8IZC6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.94■■□□□ 1.9
COL27A1Q8IZC6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.89■■□□□ 1.9
COL27A1Q8IZC6 AP006261.1-201ENST00000584783 668 ntBASIC26.87■■□□□ 1.89
COL27A1Q8IZC6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
COL27A1Q8IZC6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.85■■□□□ 1.89
COL27A1Q8IZC6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
COL27A1Q8IZC6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.84■■□□□ 1.89
COL27A1Q8IZC6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.84■■□□□ 1.89
COL27A1Q8IZC6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.83■■□□□ 1.88
COL27A1Q8IZC6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.82■■□□□ 1.88
COL27A1Q8IZC6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
COL27A1Q8IZC6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
COL27A1Q8IZC6 DUX4L28-201ENST00000623687 678 ntBASIC26.79■■□□□ 1.88
COL27A1Q8IZC6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
COL27A1Q8IZC6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.79■■□□□ 1.88
COL27A1Q8IZC6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
COL27A1Q8IZC6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.88
COL27A1Q8IZC6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.76■■□□□ 1.87
COL27A1Q8IZC6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
COL27A1Q8IZC6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL27A1Q8IZC6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
COL27A1Q8IZC6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.73■■□□□ 1.87
COL27A1Q8IZC6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL27A1Q8IZC6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
COL27A1Q8IZC6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
COL27A1Q8IZC6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL27A1Q8IZC6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
COL27A1Q8IZC6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
COL27A1Q8IZC6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
COL27A1Q8IZC6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.71■■□□□ 1.87
COL27A1Q8IZC6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
COL27A1Q8IZC6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
COL27A1Q8IZC6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL27A1Q8IZC6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.68■■□□□ 1.86
COL27A1Q8IZC6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL27A1Q8IZC6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.67■■□□□ 1.86
COL27A1Q8IZC6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
COL27A1Q8IZC6 AC087741.3-201ENST00000624270 1347 ntBASIC26.66■■□□□ 1.86
COL27A1Q8IZC6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
COL27A1Q8IZC6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
COL27A1Q8IZC6 MIR3665-201ENST00000578708 105 ntBASIC26.64■■□□□ 1.86
COL27A1Q8IZC6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL27A1Q8IZC6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL27A1Q8IZC6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL27A1Q8IZC6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
COL27A1Q8IZC6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.62■■□□□ 1.85
COL27A1Q8IZC6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL27A1Q8IZC6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL27A1Q8IZC6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.6■■□□□ 1.85
COL27A1Q8IZC6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL27A1Q8IZC6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
COL27A1Q8IZC6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL27A1Q8IZC6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
COL27A1Q8IZC6 AC044849.2-201ENST00000606596 710 ntBASIC26.57■■□□□ 1.84
COL27A1Q8IZC6 MIR762-201ENST00000390236 83 ntBASIC26.55■■□□□ 1.84
COL27A1Q8IZC6 AC005559.1-201ENST00000589661 871 ntBASIC26.55■■□□□ 1.84
COL27A1Q8IZC6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL27A1Q8IZC6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.55■■□□□ 1.84
COL27A1Q8IZC6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL27A1Q8IZC6 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL27A1Q8IZC6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.53■■□□□ 1.84
COL27A1Q8IZC6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL27A1Q8IZC6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.51■■□□□ 1.83
COL27A1Q8IZC6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
COL27A1Q8IZC6 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.5■■□□□ 1.83
COL27A1Q8IZC6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.49■■□□□ 1.83
COL27A1Q8IZC6 MIR7108-201ENST00000614319 87 ntBASIC26.47■■□□□ 1.83
COL27A1Q8IZC6 ABHD17AP4-201ENST00000411545 909 ntBASIC26.45■■□□□ 1.83
COL27A1Q8IZC6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL27A1Q8IZC6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.44■■□□□ 1.82
COL27A1Q8IZC6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.43■■□□□ 1.82
COL27A1Q8IZC6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
COL27A1Q8IZC6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL27A1Q8IZC6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.42■■□□□ 1.82
COL27A1Q8IZC6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.42■■□□□ 1.82
COL27A1Q8IZC6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL27A1Q8IZC6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
COL27A1Q8IZC6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL27A1Q8IZC6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.36■■□□□ 1.81
COL27A1Q8IZC6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL27A1Q8IZC6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL27A1Q8IZC6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL27A1Q8IZC6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL27A1Q8IZC6 WASH5P-204ENST00000632292 975 ntBASIC26.35■■□□□ 1.81
COL27A1Q8IZC6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL27A1Q8IZC6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
COL27A1Q8IZC6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.34■■□□□ 1.81
COL27A1Q8IZC6 HLA-V-202ENST00000446817 847 ntBASIC26.33■■□□□ 1.81
COL27A1Q8IZC6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.33■■□□□ 1.81
COL27A1Q8IZC6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms