Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
RAI1Q7Z5J4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
RAI1Q7Z5J4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAI1Q7Z5J4 AL162393.1-201ENST00000437852 946 ntBASIC24.11■■□□□ 1.45
RAI1Q7Z5J4 AL133380.1-201ENST00000506013 324 ntBASIC24.11■■□□□ 1.45
RAI1Q7Z5J4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAI1Q7Z5J4 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAI1Q7Z5J4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RAI1Q7Z5J4 AL391121.1-201ENST00000607967 1349 ntBASIC24.09■■□□□ 1.45
RAI1Q7Z5J4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAI1Q7Z5J4 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RAI1Q7Z5J4 CAHM-201ENST00000604200 896 ntBASIC24.08■■□□□ 1.44
RAI1Q7Z5J4 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAI1Q7Z5J4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RAI1Q7Z5J4 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC24.06■■□□□ 1.44
RAI1Q7Z5J4 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.05■■□□□ 1.44
RAI1Q7Z5J4 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.05■■□□□ 1.44
RAI1Q7Z5J4 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RAI1Q7Z5J4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RAI1Q7Z5J4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RAI1Q7Z5J4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RAI1Q7Z5J4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.02■■□□□ 1.44
RAI1Q7Z5J4 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC23.99■■□□□ 1.43
RAI1Q7Z5J4 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
RAI1Q7Z5J4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAI1Q7Z5J4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.96■■□□□ 1.43
RAI1Q7Z5J4 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
RAI1Q7Z5J4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.95■■□□□ 1.42
RAI1Q7Z5J4 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC23.89■■□□□ 1.42
RAI1Q7Z5J4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAI1Q7Z5J4 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC23.87■■□□□ 1.41
RAI1Q7Z5J4 AP006261.1-201ENST00000584783 668 ntBASIC23.87■■□□□ 1.41
RAI1Q7Z5J4 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
RAI1Q7Z5J4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.86■■□□□ 1.41
RAI1Q7Z5J4 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.85■■□□□ 1.41
RAI1Q7Z5J4 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
RAI1Q7Z5J4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAI1Q7Z5J4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAI1Q7Z5J4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAI1Q7Z5J4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RAI1Q7Z5J4 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
RAI1Q7Z5J4 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RAI1Q7Z5J4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RAI1Q7Z5J4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAI1Q7Z5J4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RAI1Q7Z5J4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RAI1Q7Z5J4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.78■■□□□ 1.4
RAI1Q7Z5J4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RAI1Q7Z5J4 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RAI1Q7Z5J4 DUX4L28-201ENST00000623687 678 ntBASIC23.75■■□□□ 1.39
RAI1Q7Z5J4 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RAI1Q7Z5J4 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RAI1Q7Z5J4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.74■■□□□ 1.39
RAI1Q7Z5J4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RAI1Q7Z5J4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RAI1Q7Z5J4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.72■■□□□ 1.39
RAI1Q7Z5J4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RAI1Q7Z5J4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
RAI1Q7Z5J4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.72■■□□□ 1.39
RAI1Q7Z5J4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.71■■□□□ 1.39
RAI1Q7Z5J4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAI1Q7Z5J4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RAI1Q7Z5J4 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC23.7■■□□□ 1.39
RAI1Q7Z5J4 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAI1Q7Z5J4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RAI1Q7Z5J4 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.69■■□□□ 1.38
RAI1Q7Z5J4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAI1Q7Z5J4 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.69■■□□□ 1.38
RAI1Q7Z5J4 MIR3665-201ENST00000578708 105 ntBASIC23.69■■□□□ 1.38
RAI1Q7Z5J4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAI1Q7Z5J4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
RAI1Q7Z5J4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.67■■□□□ 1.38
RAI1Q7Z5J4 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RAI1Q7Z5J4 AC087741.3-201ENST00000624270 1347 ntBASIC23.64■■□□□ 1.37
RAI1Q7Z5J4 AC044849.2-201ENST00000606596 710 ntBASIC23.64■■□□□ 1.37
RAI1Q7Z5J4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.62■■□□□ 1.37
RAI1Q7Z5J4 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC23.62■■□□□ 1.37
RAI1Q7Z5J4 AC005559.1-201ENST00000589661 871 ntBASIC23.61■■□□□ 1.37
RAI1Q7Z5J4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.61■■□□□ 1.37
RAI1Q7Z5J4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RAI1Q7Z5J4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RAI1Q7Z5J4 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.61■■□□□ 1.37
RAI1Q7Z5J4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAI1Q7Z5J4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RAI1Q7Z5J4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
RAI1Q7Z5J4 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAI1Q7Z5J4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RAI1Q7Z5J4 MIR762-201ENST00000390236 83 ntBASIC23.59■■□□□ 1.37
RAI1Q7Z5J4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAI1Q7Z5J4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RAI1Q7Z5J4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.57■■□□□ 1.36
RAI1Q7Z5J4 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.57■■□□□ 1.36
RAI1Q7Z5J4 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RAI1Q7Z5J4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC23.55■■□□□ 1.36
RAI1Q7Z5J4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RAI1Q7Z5J4 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.53■■□□□ 1.36
RAI1Q7Z5J4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RAI1Q7Z5J4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RAI1Q7Z5J4 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RAI1Q7Z5J4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms