Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM71Q2Q1W2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.03■■■□□ 2.56
TRIM71Q2Q1W2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
TRIM71Q2Q1W2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.02■■■□□ 2.56
TRIM71Q2Q1W2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31■■■□□ 2.55
TRIM71Q2Q1W2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.99■■■□□ 2.55
TRIM71Q2Q1W2 AL162393.1-201ENST00000437852 946 ntBASIC30.98■■■□□ 2.55
TRIM71Q2Q1W2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM71Q2Q1W2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TRIM71Q2Q1W2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.93■■■□□ 2.54
TRIM71Q2Q1W2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM71Q2Q1W2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
TRIM71Q2Q1W2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
TRIM71Q2Q1W2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM71Q2Q1W2 AP006261.1-201ENST00000584783 668 ntBASIC30.89■■■□□ 2.54
TRIM71Q2Q1W2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TRIM71Q2Q1W2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.88■■■□□ 2.53
TRIM71Q2Q1W2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM71Q2Q1W2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM71Q2Q1W2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.85■■■□□ 2.53
TRIM71Q2Q1W2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM71Q2Q1W2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM71Q2Q1W2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM71Q2Q1W2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM71Q2Q1W2 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.81■■■□□ 2.52
TRIM71Q2Q1W2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM71Q2Q1W2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.79■■■□□ 2.52
TRIM71Q2Q1W2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.79■■■□□ 2.52
TRIM71Q2Q1W2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM71Q2Q1W2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM71Q2Q1W2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
TRIM71Q2Q1W2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
TRIM71Q2Q1W2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.77■■■□□ 2.52
TRIM71Q2Q1W2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
TRIM71Q2Q1W2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TRIM71Q2Q1W2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
TRIM71Q2Q1W2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.7■■■□□ 2.51
TRIM71Q2Q1W2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.7■■■□□ 2.51
TRIM71Q2Q1W2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
TRIM71Q2Q1W2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TRIM71Q2Q1W2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
TRIM71Q2Q1W2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
TRIM71Q2Q1W2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
TRIM71Q2Q1W2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.67■■■□□ 2.5
TRIM71Q2Q1W2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
TRIM71Q2Q1W2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM71Q2Q1W2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TRIM71Q2Q1W2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
TRIM71Q2Q1W2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.65■■■□□ 2.5
TRIM71Q2Q1W2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TRIM71Q2Q1W2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.62■■■□□ 2.49
TRIM71Q2Q1W2 MIR3665-201ENST00000578708 105 ntBASIC30.62■■■□□ 2.49
TRIM71Q2Q1W2 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
TRIM71Q2Q1W2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.6■■■□□ 2.49
TRIM71Q2Q1W2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.6■■■□□ 2.49
TRIM71Q2Q1W2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
TRIM71Q2Q1W2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC30.58■■■□□ 2.49
TRIM71Q2Q1W2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM71Q2Q1W2 DUX4L28-201ENST00000623687 678 ntBASIC30.57■■■□□ 2.48
TRIM71Q2Q1W2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TRIM71Q2Q1W2 AC087741.3-201ENST00000624270 1347 ntBASIC30.55■■■□□ 2.48
TRIM71Q2Q1W2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TRIM71Q2Q1W2 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.54■■■□□ 2.48
TRIM71Q2Q1W2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.53■■■□□ 2.48
TRIM71Q2Q1W2 MIR762-201ENST00000390236 83 ntBASIC30.53■■■□□ 2.48
TRIM71Q2Q1W2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRIM71Q2Q1W2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.52■■■□□ 2.48
TRIM71Q2Q1W2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.52■■■□□ 2.48
TRIM71Q2Q1W2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TRIM71Q2Q1W2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRIM71Q2Q1W2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.46■■■□□ 2.47
TRIM71Q2Q1W2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
TRIM71Q2Q1W2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
TRIM71Q2Q1W2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.43■■■□□ 2.46
TRIM71Q2Q1W2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
TRIM71Q2Q1W2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TRIM71Q2Q1W2 ABHD17AP4-201ENST00000411545 909 ntBASIC30.42■■■□□ 2.46
TRIM71Q2Q1W2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TRIM71Q2Q1W2 AC005559.1-201ENST00000589661 871 ntBASIC30.41■■■□□ 2.46
TRIM71Q2Q1W2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
TRIM71Q2Q1W2 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.39■■■□□ 2.46
TRIM71Q2Q1W2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.39■■■□□ 2.46
TRIM71Q2Q1W2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.39■■■□□ 2.46
TRIM71Q2Q1W2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.39■■■□□ 2.45
TRIM71Q2Q1W2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
TRIM71Q2Q1W2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TRIM71Q2Q1W2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM71Q2Q1W2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
TRIM71Q2Q1W2 AC044849.2-201ENST00000606596 710 ntBASIC30.34■■■□□ 2.45
TRIM71Q2Q1W2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
TRIM71Q2Q1W2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.33■■■□□ 2.45
TRIM71Q2Q1W2 MIR7108-201ENST00000614319 87 ntBASIC30.33■■■□□ 2.45
TRIM71Q2Q1W2 WASH5P-204ENST00000632292 975 ntBASIC30.33■■■□□ 2.45
TRIM71Q2Q1W2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.32■■■□□ 2.44
TRIM71Q2Q1W2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.32■■■□□ 2.44
TRIM71Q2Q1W2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
TRIM71Q2Q1W2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TRIM71Q2Q1W2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TRIM71Q2Q1W2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
TRIM71Q2Q1W2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms