Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
PDX1P52945 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
PDX1P52945 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PDX1P52945 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
PDX1P52945 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
PDX1P52945 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.11■■□□□ 1.93
PDX1P52945 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
PDX1P52945 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.08■■□□□ 1.93
PDX1P52945 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.06■■□□□ 1.92
PDX1P52945 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PDX1P52945 AL391121.1-201ENST00000607967 1349 ntBASIC27.02■■□□□ 1.92
PDX1P52945 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDX1P52945 AL133380.1-201ENST00000506013 324 ntBASIC27.02■■□□□ 1.92
PDX1P52945 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PDX1P52945 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDX1P52945 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDX1P52945 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PDX1P52945 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC26.99■■□□□ 1.91
PDX1P52945 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.98■■□□□ 1.91
PDX1P52945 AL162393.1-201ENST00000437852 946 ntBASIC26.98■■□□□ 1.91
PDX1P52945 NRG1-221ENST00000614767 762 ntTSL 5 BASIC26.98■■□□□ 1.91
PDX1P52945 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PDX1P52945 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
PDX1P52945 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PDX1P52945 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.94■■□□□ 1.9
PDX1P52945 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PDX1P52945 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PDX1P52945 AP006261.1-201ENST00000584783 668 ntBASIC26.88■■□□□ 1.89
PDX1P52945 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.87■■□□□ 1.89
PDX1P52945 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PDX1P52945 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PDX1P52945 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PDX1P52945 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.83■■□□□ 1.89
PDX1P52945 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.82■■□□□ 1.88
PDX1P52945 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PDX1P52945 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PDX1P52945 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PDX1P52945 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PDX1P52945 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.8■■□□□ 1.88
PDX1P52945 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDX1P52945 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PDX1P52945 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PDX1P52945 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
PDX1P52945 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.78■■□□□ 1.88
PDX1P52945 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
PDX1P52945 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PDX1P52945 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.76■■□□□ 1.87
PDX1P52945 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.76■■□□□ 1.87
PDX1P52945 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
PDX1P52945 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDX1P52945 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PDX1P52945 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.74■■□□□ 1.87
PDX1P52945 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PDX1P52945 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PDX1P52945 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.72■■□□□ 1.87
PDX1P52945 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PDX1P52945 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PDX1P52945 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PDX1P52945 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.68■■□□□ 1.86
PDX1P52945 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDX1P52945 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PDX1P52945 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.68■■□□□ 1.86
PDX1P52945 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDX1P52945 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
PDX1P52945 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
PDX1P52945 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.66■■□□□ 1.86
PDX1P52945 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDX1P52945 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PDX1P52945 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.65■■□□□ 1.86
PDX1P52945 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDX1P52945 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDX1P52945 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDX1P52945 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDX1P52945 MIR3665-201ENST00000578708 105 ntBASIC26.63■■□□□ 1.85
PDX1P52945 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.62■■□□□ 1.85
PDX1P52945 DUX4L28-201ENST00000623687 678 ntBASIC26.6■■□□□ 1.85
PDX1P52945 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PDX1P52945 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDX1P52945 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDX1P52945 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PDX1P52945 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PDX1P52945 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PDX1P52945 AC087741.3-201ENST00000624270 1347 ntBASIC26.58■■□□□ 1.85
PDX1P52945 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC26.57■■□□□ 1.84
PDX1P52945 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.56■■□□□ 1.84
PDX1P52945 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PDX1P52945 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PDX1P52945 MIR762-201ENST00000390236 83 ntBASIC26.54■■□□□ 1.84
PDX1P52945 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.53■■□□□ 1.84
PDX1P52945 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDX1P52945 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PDX1P52945 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PDX1P52945 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
PDX1P52945 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PDX1P52945 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PDX1P52945 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.48■■□□□ 1.83
PDX1P52945 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PDX1P52945 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PDX1P52945 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
PDX1P52945 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms