Protein–RNA interactions for Protein: O43516

WIPF1, WAS/WASL-interacting protein family member 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WIPF1O43516 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
WIPF1O43516 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
WIPF1O43516 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.7■■□□□ 1.06
WIPF1O43516 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC21.69■■□□□ 1.06
WIPF1O43516 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.69■■□□□ 1.06
WIPF1O43516 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.68■■□□□ 1.06
WIPF1O43516 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
WIPF1O43516 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.67■■□□□ 1.06
WIPF1O43516 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
WIPF1O43516 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
WIPF1O43516 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.65■■□□□ 1.06
WIPF1O43516 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
WIPF1O43516 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.63■■□□□ 1.05
WIPF1O43516 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
WIPF1O43516 MIR3665-201ENST00000578708 105 ntBASIC21.63■■□□□ 1.05
WIPF1O43516 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
WIPF1O43516 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.62■■□□□ 1.05
WIPF1O43516 MIR4449-201ENST00000578365 66 ntBASIC21.62■■□□□ 1.05
WIPF1O43516 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
WIPF1O43516 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
WIPF1O43516 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.61■■□□□ 1.05
WIPF1O43516 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
WIPF1O43516 AC087741.3-201ENST00000624270 1347 ntBASIC21.6■■□□□ 1.05
WIPF1O43516 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
WIPF1O43516 HSD17B1P1-201ENST00000590052 955 ntBASIC21.6■■□□□ 1.05
WIPF1O43516 ZNRF2P2-203ENST00000454624 420 ntBASIC21.59■■□□□ 1.05
WIPF1O43516 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.58■■□□□ 1.05
WIPF1O43516 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
WIPF1O43516 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
WIPF1O43516 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.57■■□□□ 1.04
WIPF1O43516 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
WIPF1O43516 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
WIPF1O43516 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC21.56■■□□□ 1.04
WIPF1O43516 AL391121.1-201ENST00000607967 1349 ntBASIC21.55■■□□□ 1.04
WIPF1O43516 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
WIPF1O43516 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.53■■□□□ 1.04
WIPF1O43516 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
WIPF1O43516 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
WIPF1O43516 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
WIPF1O43516 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.5■■□□□ 1.03
WIPF1O43516 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.5■■□□□ 1.03
WIPF1O43516 AC044849.2-201ENST00000606596 710 ntBASIC21.5■■□□□ 1.03
WIPF1O43516 MVK-208ENST00000539696 608 ntTSL 5 BASIC21.48■■□□□ 1.03
WIPF1O43516 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.47■■□□□ 1.03
WIPF1O43516 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
WIPF1O43516 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.46■■□□□ 1.03
WIPF1O43516 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
WIPF1O43516 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
WIPF1O43516 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
WIPF1O43516 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
WIPF1O43516 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.44■■□□□ 1.02
WIPF1O43516 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
WIPF1O43516 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
WIPF1O43516 DUX4L28-201ENST00000623687 678 ntBASIC21.43■■□□□ 1.02
WIPF1O43516 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
WIPF1O43516 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
WIPF1O43516 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
WIPF1O43516 AC145285.7-201ENST00000614819 1539 ntBASIC21.39■■□□□ 1.02
WIPF1O43516 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
WIPF1O43516 MIR639-201ENST00000384974 98 ntBASIC21.38■■□□□ 1.01
WIPF1O43516 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
WIPF1O43516 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WIPF1O43516 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WIPF1O43516 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.34■■□□□ 1.01
WIPF1O43516 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.34■■□□□ 1.01
WIPF1O43516 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.3■■□□□ 1
WIPF1O43516 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
WIPF1O43516 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC21.29■■□□□ 1
WIPF1O43516 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.29■■□□□ 1
WIPF1O43516 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.29■■□□□ 1
WIPF1O43516 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WIPF1O43516 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.29■■□□□ 1
WIPF1O43516 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.28■■□□□ 1
WIPF1O43516 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
WIPF1O43516 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.25■□□□□ 0.99
WIPF1O43516 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.24■□□□□ 0.99
WIPF1O43516 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.24■□□□□ 0.99
WIPF1O43516 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
WIPF1O43516 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
WIPF1O43516 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
WIPF1O43516 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.23■□□□□ 0.99
WIPF1O43516 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC21.23■□□□□ 0.99
WIPF1O43516 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
WIPF1O43516 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
WIPF1O43516 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
WIPF1O43516 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.19■□□□□ 0.98
WIPF1O43516 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.18■□□□□ 0.98
WIPF1O43516 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WIPF1O43516 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WIPF1O43516 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.17■□□□□ 0.98
WIPF1O43516 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
WIPF1O43516 AL133380.1-201ENST00000506013 324 ntBASIC21.16■□□□□ 0.98
WIPF1O43516 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
WIPF1O43516 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
WIPF1O43516 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.15■□□□□ 0.98
WIPF1O43516 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.14■□□□□ 0.97
WIPF1O43516 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.14■□□□□ 0.97
WIPF1O43516 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
WIPF1O43516 AC005559.1-201ENST00000589661 871 ntBASIC21.13■□□□□ 0.97
WIPF1O43516 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms