Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LRCOL1A6NCL2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LRCOL1A6NCL2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.48■□□□□ 0.55
LRCOL1A6NCL2 AC097358.2-201ENST00000607541 1159 ntBASIC18.48■□□□□ 0.55
LRCOL1A6NCL2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC18.47■□□□□ 0.55
LRCOL1A6NCL2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
LRCOL1A6NCL2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
LRCOL1A6NCL2 AC136428.2-201ENST00000563187 214 ntBASIC18.46■□□□□ 0.55
LRCOL1A6NCL2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.44■□□□□ 0.54
LRCOL1A6NCL2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.44■□□□□ 0.54
LRCOL1A6NCL2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LRCOL1A6NCL2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.42■□□□□ 0.54
LRCOL1A6NCL2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRCOL1A6NCL2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.39■□□□□ 0.53
LRCOL1A6NCL2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.39■□□□□ 0.53
LRCOL1A6NCL2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCOL1A6NCL2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.38■□□□□ 0.53
LRCOL1A6NCL2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRCOL1A6NCL2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.37■□□□□ 0.53
LRCOL1A6NCL2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.37■□□□□ 0.53
LRCOL1A6NCL2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRCOL1A6NCL2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.36■□□□□ 0.53
LRCOL1A6NCL2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCOL1A6NCL2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCOL1A6NCL2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRCOL1A6NCL2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRCOL1A6NCL2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRCOL1A6NCL2 AL133380.1-201ENST00000506013 324 ntBASIC18.33■□□□□ 0.52
LRCOL1A6NCL2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCOL1A6NCL2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCOL1A6NCL2 SUZ12P1-203ENST00000578195 985 ntBASIC18.32■□□□□ 0.52
LRCOL1A6NCL2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCOL1A6NCL2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCOL1A6NCL2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.3■□□□□ 0.52
LRCOL1A6NCL2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRCOL1A6NCL2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.29■□□□□ 0.52
LRCOL1A6NCL2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCOL1A6NCL2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCOL1A6NCL2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.28■□□□□ 0.52
LRCOL1A6NCL2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRCOL1A6NCL2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRCOL1A6NCL2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.27■□□□□ 0.52
LRCOL1A6NCL2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
LRCOL1A6NCL2 CAHM-201ENST00000604200 896 ntBASIC18.27■□□□□ 0.52
LRCOL1A6NCL2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRCOL1A6NCL2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCOL1A6NCL2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRCOL1A6NCL2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.24■□□□□ 0.51
LRCOL1A6NCL2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRCOL1A6NCL2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
LRCOL1A6NCL2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRCOL1A6NCL2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRCOL1A6NCL2 AL391121.1-201ENST00000607967 1349 ntBASIC18.22■□□□□ 0.51
LRCOL1A6NCL2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCOL1A6NCL2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRCOL1A6NCL2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRCOL1A6NCL2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRCOL1A6NCL2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRCOL1A6NCL2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRCOL1A6NCL2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCOL1A6NCL2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRCOL1A6NCL2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRCOL1A6NCL2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCOL1A6NCL2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCOL1A6NCL2 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCOL1A6NCL2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCOL1A6NCL2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRCOL1A6NCL2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC18.13■□□□□ 0.49
LRCOL1A6NCL2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.13■□□□□ 0.49
LRCOL1A6NCL2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCOL1A6NCL2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.11■□□□□ 0.49
LRCOL1A6NCL2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCOL1A6NCL2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRCOL1A6NCL2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRCOL1A6NCL2 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCOL1A6NCL2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCOL1A6NCL2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.1■□□□□ 0.49
LRCOL1A6NCL2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCOL1A6NCL2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCOL1A6NCL2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRCOL1A6NCL2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.08■□□□□ 0.48
LRCOL1A6NCL2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCOL1A6NCL2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCOL1A6NCL2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCOL1A6NCL2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.07■□□□□ 0.48
LRCOL1A6NCL2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRCOL1A6NCL2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCOL1A6NCL2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LRCOL1A6NCL2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRCOL1A6NCL2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRCOL1A6NCL2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRCOL1A6NCL2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC18.04■□□□□ 0.48
LRCOL1A6NCL2 WASH5P-204ENST00000632292 975 ntBASIC18.03■□□□□ 0.48
LRCOL1A6NCL2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms