Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
PCDHAC2Q9Y5I4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 YBX1P1-201ENST00000445822 960 ntBASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 AC090192.1-201ENST00000517740 490 ntBASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 AC010525.1-201ENST00000585559 441 ntBASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 RARRES2P11-201ENST00000635158 484 ntBASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.05■■□□□ 1.92
PCDHAC2Q9Y5I4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDHAC2Q9Y5I4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDHAC2Q9Y5I4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDHAC2Q9Y5I4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC27.01■■□□□ 1.92
PCDHAC2Q9Y5I4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHAC2Q9Y5I4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHAC2Q9Y5I4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 AC133637.1-201ENST00000624115 1537 ntBASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHAC2Q9Y5I4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 IGHV3-19-201ENST00000521488 291 ntBASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHAC2Q9Y5I4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDHAC2Q9Y5I4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHAC2Q9Y5I4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.97■■□□□ 1.91
PCDHAC2Q9Y5I4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
PCDHAC2Q9Y5I4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.97■■□□□ 1.91
PCDHAC2Q9Y5I4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHAC2Q9Y5I4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 AL137784.2-201ENST00000607332 1000 ntBASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms