Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 AL031602.1-201ENST00000633169 911 ntBASIC17.64■□□□□ 0.41
LINC01006Q8NI28 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 AP003733.4-201ENST00000623785 1697 ntBASIC17.64■□□□□ 0.41
LINC01006Q8NI28 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.64■□□□□ 0.41
LINC01006Q8NI28 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 AC022211.4-201ENST00000625094 2161 ntBASIC17.63■□□□□ 0.41
LINC01006Q8NI28 AC135731.1-201ENST00000569415 2548 ntBASIC17.63■□□□□ 0.41
LINC01006Q8NI28 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01006Q8NI28 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.63■□□□□ 0.41
LINC01006Q8NI28 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 MIR572-201ENST00000384983 95 ntBASIC17.62■□□□□ 0.41
LINC01006Q8NI28 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 KRT18P5-201ENST00000436075 1291 ntBASIC17.62■□□□□ 0.41
LINC01006Q8NI28 AC022517.1-201ENST00000592429 346 ntBASIC17.62■□□□□ 0.41
LINC01006Q8NI28 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LINC01006Q8NI28 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 AC027612.3-201ENST00000413684 1047 ntBASIC17.61■□□□□ 0.41
LINC01006Q8NI28 AC123595.1-201ENST00000440769 1046 ntBASIC17.61■□□□□ 0.41
LINC01006Q8NI28 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01006Q8NI28 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L2-201ENST00000561772 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 AL499627.2-201ENST00000606283 725 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 IKBKGP1-201ENST00000612193 1073 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L6-201ENST00000626483 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L1-201ENST00000627662 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L8-201ENST00000629013 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L3-201ENST00000630187 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L7-201ENST00000630678 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 DUX4L5-201ENST00000630834 1275 ntBASIC17.6■□□□□ 0.41
LINC01006Q8NI28 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01006Q8NI28 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 AL354811.1-201ENST00000610286 706 ntBASIC17.59■□□□□ 0.41
LINC01006Q8NI28 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01006Q8NI28 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms