Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDH15Q96QU1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 AC123595.1-201ENST00000440769 1046 ntBASIC22.29■■□□□ 1.16
PCDH15Q96QU1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
PCDH15Q96QU1 AL358852.1-201ENST00000623174 1268 ntBASIC22.29■■□□□ 1.16
PCDH15Q96QU1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 IGHV3-19-201ENST00000521488 291 ntBASIC22.28■■□□□ 1.16
PCDH15Q96QU1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDH15Q96QU1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDH15Q96QU1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PCDH15Q96QU1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.27■■□□□ 1.16
PCDH15Q96QU1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PCDH15Q96QU1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PCDH15Q96QU1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.27■■□□□ 1.15
PCDH15Q96QU1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.27■■□□□ 1.15
PCDH15Q96QU1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDH15Q96QU1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH15Q96QU1 MIR572-201ENST00000384983 95 ntBASIC22.26■■□□□ 1.15
PCDH15Q96QU1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDH15Q96QU1 ID1-201ENST00000376105 1233 ntBASIC22.25■■□□□ 1.15
PCDH15Q96QU1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 pRNA.6-201ENST00000610482 90 ntBASIC22.25■■□□□ 1.15
PCDH15Q96QU1 pRNA.5-201ENST00000612139 90 ntBASIC22.25■■□□□ 1.15
PCDH15Q96QU1 pRNA.11-201ENST00000618423 90 ntBASIC22.25■■□□□ 1.15
PCDH15Q96QU1 pRNA.13-201ENST00000619112 90 ntBASIC22.25■■□□□ 1.15
PCDH15Q96QU1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDH15Q96QU1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH15Q96QU1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDH15Q96QU1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH15Q96QU1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDH15Q96QU1 AC004911.1-201ENST00000416316 871 ntBASIC22.24■■□□□ 1.15
PCDH15Q96QU1 CCDC92B-201ENST00000575506 885 ntBASIC22.24■■□□□ 1.15
PCDH15Q96QU1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH15Q96QU1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH15Q96QU1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDH15Q96QU1 KRT18P14-201ENST00000534205 1250 ntBASIC22.23■■□□□ 1.15
PCDH15Q96QU1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDH15Q96QU1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 MIR6084-201ENST00000622012 110 ntBASIC22.22■■□□□ 1.15
PCDH15Q96QU1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDH15Q96QU1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDH15Q96QU1 AC145676.1-201ENST00000514988 2004 ntBASIC22.21■■□□□ 1.15
PCDH15Q96QU1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
PCDH15Q96QU1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDH15Q96QU1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.2■■□□□ 1.14
PCDH15Q96QU1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDH15Q96QU1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms