Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
BEST1O76090 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
BEST1O76090 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.84■■□□□ 1.41
BEST1O76090 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
BEST1O76090 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
BEST1O76090 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
BEST1O76090 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.83■■□□□ 1.41
BEST1O76090 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.83■■□□□ 1.41
BEST1O76090 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
BEST1O76090 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.83■■□□□ 1.4
BEST1O76090 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
BEST1O76090 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST1O76090 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST1O76090 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.82■■□□□ 1.4
BEST1O76090 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST1O76090 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.82■■□□□ 1.4
BEST1O76090 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST1O76090 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.82■■□□□ 1.4
BEST1O76090 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
BEST1O76090 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
BEST1O76090 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
BEST1O76090 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
BEST1O76090 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST1O76090 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BEST1O76090 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.81■■□□□ 1.4
BEST1O76090 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.81■■□□□ 1.4
BEST1O76090 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
BEST1O76090 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST1O76090 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
BEST1O76090 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.81■■□□□ 1.4
BEST1O76090 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST1O76090 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST1O76090 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
BEST1O76090 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.81■■□□□ 1.4
BEST1O76090 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.8■■□□□ 1.4
BEST1O76090 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
BEST1O76090 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 AC096631.2-201ENST00000436136 790 ntBASIC23.8■■□□□ 1.4
BEST1O76090 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.8■■□□□ 1.4
BEST1O76090 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
BEST1O76090 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.8■■□□□ 1.4
BEST1O76090 AC099791.2-201ENST00000605725 427 ntBASIC23.8■■□□□ 1.4
BEST1O76090 AC110285.6-201ENST00000617652 491 ntBASIC23.8■■□□□ 1.4
BEST1O76090 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
BEST1O76090 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
BEST1O76090 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
BEST1O76090 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
BEST1O76090 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
BEST1O76090 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.78■■□□□ 1.4
BEST1O76090 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.78■■□□□ 1.4
BEST1O76090 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.78■■□□□ 1.4
BEST1O76090 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.78■■□□□ 1.4
BEST1O76090 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.78■■□□□ 1.4
BEST1O76090 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
BEST1O76090 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
BEST1O76090 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
BEST1O76090 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEST1O76090 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
BEST1O76090 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
BEST1O76090 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.77■■□□□ 1.4
BEST1O76090 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
BEST1O76090 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.77■■□□□ 1.4
BEST1O76090 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BEST1O76090 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BEST1O76090 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.76■■□□□ 1.39
BEST1O76090 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
BEST1O76090 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
BEST1O76090 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
BEST1O76090 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
BEST1O76090 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.76■■□□□ 1.39
BEST1O76090 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
BEST1O76090 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.76■■□□□ 1.39
BEST1O76090 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
BEST1O76090 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
BEST1O76090 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
BEST1O76090 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.75■■□□□ 1.39
BEST1O76090 UNC93B3-201ENST00000308076 687 ntBASIC23.75■■□□□ 1.39
BEST1O76090 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
BEST1O76090 AC006455.2-201ENST00000429931 906 ntBASIC23.75■■□□□ 1.39
BEST1O76090 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.75■■□□□ 1.39
BEST1O76090 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms