Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 MIR6084-201ENST00000622012 110 ntBASIC32.09■■■□□ 2.73
XRN1Q8IZH2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC32.09■■■□□ 2.73
XRN1Q8IZH2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
XRN1Q8IZH2 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
XRN1Q8IZH2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC32.08■■■□□ 2.73
XRN1Q8IZH2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC32.08■■■□□ 2.73
XRN1Q8IZH2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
XRN1Q8IZH2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
XRN1Q8IZH2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
XRN1Q8IZH2 AC004911.1-201ENST00000416316 871 ntBASIC32.07■■■□□ 2.72
XRN1Q8IZH2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
XRN1Q8IZH2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
XRN1Q8IZH2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
XRN1Q8IZH2 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 MIR572-201ENST00000384983 95 ntBASIC32.06■■■□□ 2.72
XRN1Q8IZH2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 pRNA.6-201ENST00000610482 90 ntBASIC32.06■■■□□ 2.72
XRN1Q8IZH2 pRNA.5-201ENST00000612139 90 ntBASIC32.06■■■□□ 2.72
XRN1Q8IZH2 pRNA.11-201ENST00000618423 90 ntBASIC32.06■■■□□ 2.72
XRN1Q8IZH2 pRNA.13-201ENST00000619112 90 ntBASIC32.06■■■□□ 2.72
XRN1Q8IZH2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
XRN1Q8IZH2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
XRN1Q8IZH2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
XRN1Q8IZH2 AC092803.2-201ENST00000564287 1899 ntBASIC32.05■■■□□ 2.72
XRN1Q8IZH2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC32.05■■■□□ 2.72
XRN1Q8IZH2 TERF1P2-201ENST00000583350 1212 ntBASIC32.05■■■□□ 2.72
XRN1Q8IZH2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.05■■■□□ 2.72
XRN1Q8IZH2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC32.05■■■□□ 2.72
XRN1Q8IZH2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
XRN1Q8IZH2 SLC6A10P-202ENST00000431994 2058 ntBASIC32.05■■■□□ 2.72
XRN1Q8IZH2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
XRN1Q8IZH2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC32.03■■■□□ 2.72
XRN1Q8IZH2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.03■■■□□ 2.72
XRN1Q8IZH2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
XRN1Q8IZH2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
XRN1Q8IZH2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
XRN1Q8IZH2 KRT18P14-201ENST00000534205 1250 ntBASIC32.03■■■□□ 2.72
XRN1Q8IZH2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 AL354811.1-201ENST00000610286 706 ntBASIC32.02■■■□□ 2.72
XRN1Q8IZH2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
XRN1Q8IZH2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
XRN1Q8IZH2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.01■■■□□ 2.72
XRN1Q8IZH2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC32.01■■■□□ 2.72
XRN1Q8IZH2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
XRN1Q8IZH2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32■■■□□ 2.71
XRN1Q8IZH2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
XRN1Q8IZH2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32■■■□□ 2.71
XRN1Q8IZH2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC32■■■□□ 2.71
XRN1Q8IZH2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
XRN1Q8IZH2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC32■■■□□ 2.71
XRN1Q8IZH2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
XRN1Q8IZH2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32■■■□□ 2.71
XRN1Q8IZH2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
XRN1Q8IZH2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC32■■■□□ 2.71
XRN1Q8IZH2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
XRN1Q8IZH2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
XRN1Q8IZH2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.97■■■□□ 2.71
XRN1Q8IZH2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.96■■■□□ 2.71
XRN1Q8IZH2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.96■■■□□ 2.71
XRN1Q8IZH2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
XRN1Q8IZH2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.96■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms