Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.99■■□□□ 1.11
SLC6A12P48065 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SLC6A12P48065 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.99■■□□□ 1.11
SLC6A12P48065 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SLC6A12P48065 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A12P48065 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A12P48065 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.98■■□□□ 1.11
SLC6A12P48065 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.98■■□□□ 1.11
SLC6A12P48065 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC6A12P48065 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.98■■□□□ 1.11
SLC6A12P48065 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SLC6A12P48065 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
SLC6A12P48065 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A12P48065 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A12P48065 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC6A12P48065 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A12P48065 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.97■■□□□ 1.11
SLC6A12P48065 AC009299.2-201ENST00000482477 511 ntBASIC21.97■■□□□ 1.11
SLC6A12P48065 MIR6722-201ENST00000617286 78 ntBASIC21.97■■□□□ 1.11
SLC6A12P48065 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A12P48065 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.97■■□□□ 1.11
SLC6A12P48065 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A12P48065 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SLC6A12P48065 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A12P48065 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A12P48065 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A12P48065 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SLC6A12P48065 AC092028.1-203ENST00000608262 953 ntBASIC21.96■■□□□ 1.11
SLC6A12P48065 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.96■■□□□ 1.11
SLC6A12P48065 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SLC6A12P48065 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A12P48065 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.96■■□□□ 1.11
SLC6A12P48065 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SLC6A12P48065 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SLC6A12P48065 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.95■■□□□ 1.1
SLC6A12P48065 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SLC6A12P48065 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.95■■□□□ 1.1
SLC6A12P48065 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SLC6A12P48065 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC6A12P48065 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC6A12P48065 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.95■■□□□ 1.1
SLC6A12P48065 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC6A12P48065 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC6A12P48065 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC6A12P48065 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.94■■□□□ 1.1
SLC6A12P48065 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC6A12P48065 KRT125P-201ENST00000546827 989 ntBASIC21.94■■□□□ 1.1
SLC6A12P48065 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC6A12P48065 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC6A12P48065 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC6A12P48065 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.94■■□□□ 1.1
SLC6A12P48065 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC6A12P48065 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A12P48065 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC6A12P48065 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A12P48065 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC6A12P48065 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A12P48065 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC6A12P48065 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A12P48065 DUSP8P3-201ENST00000399571 1760 ntBASIC21.93■■□□□ 1.1
SLC6A12P48065 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
SLC6A12P48065 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SLC6A12P48065 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC6A12P48065 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC6A12P48065 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC6A12P48065 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SLC6A12P48065 AC239859.2-201ENST00000444165 318 ntBASIC21.92■■□□□ 1.1
SLC6A12P48065 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC6A12P48065 MIR4787-201ENST00000607364 84 ntBASIC21.92■■□□□ 1.1
SLC6A12P48065 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A12P48065 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A12P48065 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC6A12P48065 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC6A12P48065 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.91■■□□□ 1.1
SLC6A12P48065 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.91■■□□□ 1.1
SLC6A12P48065 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms