Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
LRIT1Q9P2V4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.1■■□□□ 1.13
LRIT1Q9P2V4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
LRIT1Q9P2V4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRIT1Q9P2V4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.1■■□□□ 1.13
LRIT1Q9P2V4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRIT1Q9P2V4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
LRIT1Q9P2V4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 SERBP1P1-201ENST00000396021 1160 ntBASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 AL136967.2-201ENST00000623968 743 ntBASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRIT1Q9P2V4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
LRIT1Q9P2V4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 C17orf82-201ENST00000623772 1530 ntBASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.07■■□□□ 1.12
LRIT1Q9P2V4 AC022211.4-201ENST00000625094 2161 ntBASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 AF213884.3-201ENST00000563833 479 ntBASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 MIR4767-201ENST00000582827 78 ntBASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.06■■□□□ 1.12
LRIT1Q9P2V4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 AC241377.3-202ENST00000626088 1088 ntBASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 AC241585.3-202ENST00000628937 1088 ntBASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 AC245100.8-202ENST00000629247 1058 ntBASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 AC020928.2-201ENST00000588717 2197 ntBASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
LRIT1Q9P2V4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 MIR939-201ENST00000401314 82 ntBASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.04■■□□□ 1.12
LRIT1Q9P2V4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRIT1Q9P2V4 AP001330.3-201ENST00000520123 633 ntBASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms