Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AL358852.1-201ENST00000623174 1268 ntBASIC35.36■■■■□ 3.25
COL17A1Q9UMD9 C17orf82-201ENST00000623772 1530 ntBASIC35.36■■■■□ 3.25
COL17A1Q9UMD9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC35.36■■■■□ 3.25
COL17A1Q9UMD9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
COL17A1Q9UMD9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 KRT18P14-201ENST00000534205 1250 ntBASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 KRT18P61-201ENST00000585825 1298 ntBASIC35.35■■■■□ 3.25
COL17A1Q9UMD9 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC35.34■■■■□ 3.25
COL17A1Q9UMD9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
COL17A1Q9UMD9 MIR3181-201ENST00000578512 73 ntBASIC35.33■■■■□ 3.25
COL17A1Q9UMD9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC35.33■■■■□ 3.25
COL17A1Q9UMD9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC35.33■■■■□ 3.25
COL17A1Q9UMD9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
COL17A1Q9UMD9 AC073111.5-205ENST00000641717 521 ntBASIC35.32■■■■□ 3.24
COL17A1Q9UMD9 AC006015.1-201ENST00000429970 570 ntBASIC35.31■■■■□ 3.24
COL17A1Q9UMD9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
COL17A1Q9UMD9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
COL17A1Q9UMD9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
COL17A1Q9UMD9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
COL17A1Q9UMD9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC35.3■■■■□ 3.24
COL17A1Q9UMD9 AC012414.1-201ENST00000556676 535 ntBASIC35.3■■■■□ 3.24
COL17A1Q9UMD9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
COL17A1Q9UMD9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.3■■■■□ 3.24
COL17A1Q9UMD9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 MAP2K4P1-201ENST00000438453 1195 ntBASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
COL17A1Q9UMD9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
COL17A1Q9UMD9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC35.28■■■■□ 3.24
COL17A1Q9UMD9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
COL17A1Q9UMD9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
COL17A1Q9UMD9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
COL17A1Q9UMD9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
COL17A1Q9UMD9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC35.27■■■■□ 3.24
COL17A1Q9UMD9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC35.27■■■■□ 3.24
COL17A1Q9UMD9 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC35.26■■■■□ 3.24
COL17A1Q9UMD9 REST-206ENST00000612429 1376 ntTSL 5 BASIC35.26■■■■□ 3.24
COL17A1Q9UMD9 REST-207ENST00000616975 1370 ntTSL 5 BASIC35.26■■■■□ 3.24
COL17A1Q9UMD9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC35.26■■■■□ 3.23
COL17A1Q9UMD9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC35.26■■■■□ 3.23
COL17A1Q9UMD9 AC126544.1-201ENST00000580842 1059 ntBASIC35.26■■■■□ 3.23
COL17A1Q9UMD9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.26■■■■□ 3.23
COL17A1Q9UMD9 LINC01003-201ENST00000564834 1764 ntBASIC35.26■■■■□ 3.23
COL17A1Q9UMD9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC35.26■■■■□ 3.23
COL17A1Q9UMD9 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
COL17A1Q9UMD9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC35.24■■■■□ 3.23
COL17A1Q9UMD9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC35.23■■■■□ 3.23
COL17A1Q9UMD9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC35.23■■■■□ 3.23
COL17A1Q9UMD9 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC35.23■■■■□ 3.23
COL17A1Q9UMD9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC35.23■■■■□ 3.23
COL17A1Q9UMD9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 PPP1R14BP3-201ENST00000509033 445 ntBASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 AC241377.3-202ENST00000626088 1088 ntBASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 AC241585.3-202ENST00000628937 1088 ntBASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC35.22■■■■□ 3.23
COL17A1Q9UMD9 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC35.21■■■■□ 3.23
COL17A1Q9UMD9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
COL17A1Q9UMD9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC35.21■■■■□ 3.23
COL17A1Q9UMD9 AL355802.2-201ENST00000402069 882 ntBASIC35.21■■■■□ 3.23
COL17A1Q9UMD9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC35.2■■■■□ 3.23
COL17A1Q9UMD9 MIR572-201ENST00000384983 95 ntBASIC35.2■■■■□ 3.23
COL17A1Q9UMD9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC35.2■■■■□ 3.23
COL17A1Q9UMD9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC35.2■■■■□ 3.23
COL17A1Q9UMD9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
COL17A1Q9UMD9 AP004609.3-201ENST00000610705 1884 ntBASIC35.19■■■■□ 3.22
COL17A1Q9UMD9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
COL17A1Q9UMD9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC35.19■■■■□ 3.22
COL17A1Q9UMD9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC35.19■■■■□ 3.22
COL17A1Q9UMD9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC35.19■■■■□ 3.22
COL17A1Q9UMD9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
COL17A1Q9UMD9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
COL17A1Q9UMD9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC35.17■■■■□ 3.22
COL17A1Q9UMD9 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms