Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 AL157400.5-201ENST00000507624 621 ntBASIC19.65■□□□□ 0.74
BEST4Q8NFU0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.65■□□□□ 0.74
BEST4Q8NFU0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.74
BEST4Q8NFU0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
BEST4Q8NFU0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
BEST4Q8NFU0 HLA-L-211ENST00000482052 1765 ntBASIC19.63■□□□□ 0.73
BEST4Q8NFU0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
BEST4Q8NFU0 AC137767.1-201ENST00000602918 1920 ntBASIC19.63■□□□□ 0.73
BEST4Q8NFU0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
BEST4Q8NFU0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 AL137060.1-201ENST00000618151 2648 ntBASIC19.61■□□□□ 0.73
BEST4Q8NFU0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
BEST4Q8NFU0 SLC25A24-204ENST00000569674 2357 ntBASIC19.61■□□□□ 0.73
BEST4Q8NFU0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 MIR3648-2-201ENST00000581792 180 ntBASIC19.6■□□□□ 0.73
BEST4Q8NFU0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 MIR3648-1-201ENST00000615959 180 ntBASIC19.6■□□□□ 0.73
BEST4Q8NFU0 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
BEST4Q8NFU0 SMPD5-203ENST00000639008 1464 ntBASIC19.6■□□□□ 0.73
BEST4Q8NFU0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 GUSBP5-202ENST00000510805 1989 ntBASIC19.59■□□□□ 0.73
BEST4Q8NFU0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
BEST4Q8NFU0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
BEST4Q8NFU0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
BEST4Q8NFU0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST4Q8NFU0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST4Q8NFU0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST4Q8NFU0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
BEST4Q8NFU0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
BEST4Q8NFU0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
BEST4Q8NFU0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms