Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TM4SF4P48230 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.67■■□□□ 1.86
TM4SF4P48230 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.67■■□□□ 1.86
TM4SF4P48230 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.67■■□□□ 1.86
TM4SF4P48230 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.67■■□□□ 1.86
TM4SF4P48230 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.67■■□□□ 1.86
TM4SF4P48230 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.67■■□□□ 1.86
TM4SF4P48230 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TM4SF4P48230 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TM4SF4P48230 TSPY26P-201ENST00000476365 1326 ntBASIC26.66■■□□□ 1.86
TM4SF4P48230 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TM4SF4P48230 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.66■■□□□ 1.86
TM4SF4P48230 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TM4SF4P48230 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TM4SF4P48230 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.66■■□□□ 1.86
TM4SF4P48230 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
TM4SF4P48230 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
TM4SF4P48230 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.65■■□□□ 1.86
TM4SF4P48230 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
TM4SF4P48230 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.65■■□□□ 1.86
TM4SF4P48230 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
TM4SF4P48230 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.65■■□□□ 1.86
TM4SF4P48230 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
TM4SF4P48230 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TM4SF4P48230 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TM4SF4P48230 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TM4SF4P48230 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TM4SF4P48230 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.64■■□□□ 1.86
TM4SF4P48230 AC009086.3-201ENST00000623486 1008 ntBASIC26.64■■□□□ 1.86
TM4SF4P48230 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
TM4SF4P48230 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TM4SF4P48230 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TM4SF4P48230 NTF6G-201ENST00000591094 616 ntBASIC26.63■■□□□ 1.85
TM4SF4P48230 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
TM4SF4P48230 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TM4SF4P48230 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TM4SF4P48230 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TM4SF4P48230 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.62■■□□□ 1.85
TM4SF4P48230 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.62■■□□□ 1.85
TM4SF4P48230 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.62■■□□□ 1.85
TM4SF4P48230 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.62■■□□□ 1.85
TM4SF4P48230 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.62■■□□□ 1.85
TM4SF4P48230 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TM4SF4P48230 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TM4SF4P48230 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.61■■□□□ 1.85
TM4SF4P48230 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.61■■□□□ 1.85
TM4SF4P48230 CCDC92B-201ENST00000575506 885 ntBASIC26.61■■□□□ 1.85
TM4SF4P48230 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
TM4SF4P48230 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TM4SF4P48230 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TM4SF4P48230 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
TM4SF4P48230 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TM4SF4P48230 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
TM4SF4P48230 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.6■■□□□ 1.85
TM4SF4P48230 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.6■■□□□ 1.85
TM4SF4P48230 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TM4SF4P48230 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.6■■□□□ 1.85
TM4SF4P48230 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.59■■□□□ 1.85
TM4SF4P48230 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
TM4SF4P48230 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TM4SF4P48230 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC26.59■■□□□ 1.85
TM4SF4P48230 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
TM4SF4P48230 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
TM4SF4P48230 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TM4SF4P48230 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
TM4SF4P48230 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.58■■□□□ 1.85
TM4SF4P48230 MIR572-201ENST00000384983 95 ntBASIC26.58■■□□□ 1.85
TM4SF4P48230 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC26.58■■□□□ 1.85
TM4SF4P48230 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.58■■□□□ 1.85
TM4SF4P48230 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TM4SF4P48230 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.57■■□□□ 1.84
TM4SF4P48230 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TM4SF4P48230 AC096887.2-201ENST00000623443 1957 ntBASIC26.57■■□□□ 1.84
TM4SF4P48230 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.56■■□□□ 1.84
TM4SF4P48230 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TM4SF4P48230 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TM4SF4P48230 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TM4SF4P48230 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.56■■□□□ 1.84
TM4SF4P48230 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.56■■□□□ 1.84
TM4SF4P48230 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TM4SF4P48230 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.56■■□□□ 1.84
TM4SF4P48230 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.56■■□□□ 1.84
TM4SF4P48230 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.56■■□□□ 1.84
TM4SF4P48230 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TM4SF4P48230 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
TM4SF4P48230 AC139426.1-201ENST00000568218 2529 ntBASIC26.56■■□□□ 1.84
TM4SF4P48230 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TM4SF4P48230 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TM4SF4P48230 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TM4SF4P48230 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TM4SF4P48230 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.55■■□□□ 1.84
TM4SF4P48230 AC012414.1-201ENST00000556676 535 ntBASIC26.55■■□□□ 1.84
TM4SF4P48230 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
TM4SF4P48230 AL354811.1-201ENST00000610286 706 ntBASIC26.55■■□□□ 1.84
TM4SF4P48230 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.55■■□□□ 1.84
TM4SF4P48230 MIR6084-201ENST00000622012 110 ntBASIC26.55■■□□□ 1.84
TM4SF4P48230 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
TM4SF4P48230 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TM4SF4P48230 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TM4SF4P48230 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms