Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TFF1P04155 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TFF1P04155 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TFF1P04155 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TFF1P04155 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 BX664725.1-201ENST00000438252 379 ntBASIC19.21■□□□□ 0.67
TFF1P04155 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.21■□□□□ 0.67
TFF1P04155 AL035685.1-201ENST00000636663 812 ntBASIC19.21■□□□□ 0.67
TFF1P04155 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TFF1P04155 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TFF1P04155 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.2■□□□□ 0.66
TFF1P04155 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.2■□□□□ 0.66
TFF1P04155 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TFF1P04155 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TFF1P04155 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.2■□□□□ 0.66
TFF1P04155 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.2■□□□□ 0.66
TFF1P04155 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.2■□□□□ 0.66
TFF1P04155 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TFF1P04155 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TFF1P04155 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TFF1P04155 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TFF1P04155 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TFF1P04155 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.19■□□□□ 0.66
TFF1P04155 AC021242.3-201ENST00000607598 1377 ntBASIC19.19■□□□□ 0.66
TFF1P04155 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.19■□□□□ 0.66
TFF1P04155 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TFF1P04155 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TFF1P04155 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.19■□□□□ 0.66
TFF1P04155 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
TFF1P04155 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TFF1P04155 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TFF1P04155 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.18■□□□□ 0.66
TFF1P04155 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TFF1P04155 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.18■□□□□ 0.66
TFF1P04155 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.18■□□□□ 0.66
TFF1P04155 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.18■□□□□ 0.66
TFF1P04155 MIR4787-201ENST00000607364 84 ntBASIC19.18■□□□□ 0.66
TFF1P04155 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.18■□□□□ 0.66
TFF1P04155 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TFF1P04155 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TFF1P04155 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TFF1P04155 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.17■□□□□ 0.66
TFF1P04155 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TFF1P04155 TSPY9P-201ENST00000440215 945 ntBASIC19.17■□□□□ 0.66
TFF1P04155 TSPY11P-201ENST00000442607 1045 ntBASIC19.17■□□□□ 0.66
TFF1P04155 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.17■□□□□ 0.66
TFF1P04155 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.17■□□□□ 0.66
TFF1P04155 SNX5-217ENST00000606557 1087 ntBASIC19.17■□□□□ 0.66
TFF1P04155 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TFF1P04155 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TFF1P04155 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.16■□□□□ 0.66
TFF1P04155 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TFF1P04155 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
TFF1P04155 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.16■□□□□ 0.66
TFF1P04155 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.16■□□□□ 0.66
TFF1P04155 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TFF1P04155 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TFF1P04155 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TFF1P04155 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TFF1P04155 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TFF1P04155 AC004448.1-201ENST00000458332 883 ntBASIC19.15■□□□□ 0.66
TFF1P04155 KRT125P-201ENST00000546827 989 ntBASIC19.15■□□□□ 0.66
TFF1P04155 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TFF1P04155 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
TFF1P04155 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TFF1P04155 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TFF1P04155 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TFF1P04155 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TFF1P04155 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TFF1P04155 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.14■□□□□ 0.65
TFF1P04155 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TFF1P04155 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TFF1P04155 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms