Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SPDEFO95238 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
SPDEFO95238 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPDEFO95238 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.29■□□□□ 0.68
SPDEFO95238 AC007029.1-201ENST00000604183 313 ntBASIC19.29■□□□□ 0.68
SPDEFO95238 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.29■□□□□ 0.68
SPDEFO95238 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.29■□□□□ 0.68
SPDEFO95238 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.29■□□□□ 0.68
SPDEFO95238 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SPDEFO95238 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SPDEFO95238 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.28■□□□□ 0.68
SPDEFO95238 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.28■□□□□ 0.68
SPDEFO95238 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SPDEFO95238 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SPDEFO95238 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.27■□□□□ 0.68
SPDEFO95238 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.27■□□□□ 0.68
SPDEFO95238 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.27■□□□□ 0.68
SPDEFO95238 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.27■□□□□ 0.68
SPDEFO95238 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SPDEFO95238 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.27■□□□□ 0.68
SPDEFO95238 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SPDEFO95238 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.27■□□□□ 0.67
SPDEFO95238 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.26■□□□□ 0.67
SPDEFO95238 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.26■□□□□ 0.67
SPDEFO95238 AC007375.3-201ENST00000600936 2314 ntBASIC19.26■□□□□ 0.67
SPDEFO95238 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SPDEFO95238 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SPDEFO95238 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.26■□□□□ 0.67
SPDEFO95238 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SPDEFO95238 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPDEFO95238 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
SPDEFO95238 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPDEFO95238 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SPDEFO95238 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
SPDEFO95238 AC093536.1-201ENST00000569153 554 ntBASIC19.25■□□□□ 0.67
SPDEFO95238 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.25■□□□□ 0.67
SPDEFO95238 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SPDEFO95238 RNF126P1-201ENST00000567452 1320 ntBASIC19.25■□□□□ 0.67
SPDEFO95238 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPDEFO95238 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPDEFO95238 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPDEFO95238 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SPDEFO95238 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.24■□□□□ 0.67
SPDEFO95238 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.24■□□□□ 0.67
SPDEFO95238 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPDEFO95238 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.24■□□□□ 0.67
SPDEFO95238 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.24■□□□□ 0.67
SPDEFO95238 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPDEFO95238 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SPDEFO95238 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SPDEFO95238 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.23■□□□□ 0.67
SPDEFO95238 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
SPDEFO95238 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.23■□□□□ 0.67
SPDEFO95238 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPDEFO95238 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.22■□□□□ 0.67
SPDEFO95238 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SPDEFO95238 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.22■□□□□ 0.67
SPDEFO95238 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.22■□□□□ 0.67
SPDEFO95238 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SPDEFO95238 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPDEFO95238 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SPDEFO95238 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SPDEFO95238 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPDEFO95238 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms