Protein–RNA interactions for Protein: O75888

TNFSF13, Tumor necrosis factor ligand superfamily member 13, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13O75888 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF13O75888 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.24■□□□□ 0.83
TNFSF13O75888 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF13O75888 AL161729.1-201ENST00000604104 1402 ntBASIC20.24■□□□□ 0.83
TNFSF13O75888 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TNFSF13O75888 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.24■□□□□ 0.83
TNFSF13O75888 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TNFSF13O75888 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF13O75888 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF13O75888 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF13O75888 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF13O75888 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF13O75888 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF13O75888 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.23■□□□□ 0.83
TNFSF13O75888 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TNFSF13O75888 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TNFSF13O75888 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.23■□□□□ 0.83
TNFSF13O75888 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF13O75888 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF13O75888 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF13O75888 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF13O75888 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF13O75888 AC133561.4-201ENST00000566112 224 ntBASIC20.22■□□□□ 0.83
TNFSF13O75888 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF13O75888 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TNFSF13O75888 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.22■□□□□ 0.83
TNFSF13O75888 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFSF13O75888 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF13O75888 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TNFSF13O75888 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.21■□□□□ 0.83
TNFSF13O75888 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TNFSF13O75888 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.21■□□□□ 0.83
TNFSF13O75888 AP003733.4-201ENST00000623785 1697 ntBASIC20.21■□□□□ 0.83
TNFSF13O75888 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 UNC93B3-201ENST00000308076 687 ntBASIC20.2■□□□□ 0.82
TNFSF13O75888 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 AC005837.3-201ENST00000612163 286 ntBASIC20.2■□□□□ 0.82
TNFSF13O75888 AC106739.1-201ENST00000617035 715 ntBASIC20.2■□□□□ 0.82
TNFSF13O75888 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TNFSF13O75888 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TNFSF13O75888 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.2■□□□□ 0.82
TNFSF13O75888 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF13O75888 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.19■□□□□ 0.82
TNFSF13O75888 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF13O75888 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TNFSF13O75888 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF13O75888 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF13O75888 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.19■□□□□ 0.82
TNFSF13O75888 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF13O75888 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TNFSF13O75888 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TNFSF13O75888 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNFSF13O75888 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF13O75888 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.18■□□□□ 0.82
TNFSF13O75888 PBX2P1-201ENST00000493219 1291 ntBASIC20.18■□□□□ 0.82
TNFSF13O75888 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF13O75888 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF13O75888 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF13O75888 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TNFSF13O75888 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNFSF13O75888 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNFSF13O75888 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TNFSF13O75888 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 AC009102.2-201ENST00000606772 1639 ntBASIC20.17■□□□□ 0.82
TNFSF13O75888 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF13O75888 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF13O75888 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.17■□□□□ 0.82
TNFSF13O75888 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF13O75888 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TNFSF13O75888 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TNFSF13O75888 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.17■□□□□ 0.82
TNFSF13O75888 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.17■□□□□ 0.82
TNFSF13O75888 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TNFSF13O75888 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF13O75888 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFSF13O75888 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TNFSF13O75888 AL136162.1-201ENST00000607711 1078 ntBASIC20.16■□□□□ 0.82
TNFSF13O75888 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TNFSF13O75888 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFSF13O75888 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms