Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYTIPO60759 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYTIPO60759 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.43■□□□□ 0.86
CYTIPO60759 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.43■□□□□ 0.86
CYTIPO60759 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.43■□□□□ 0.86
CYTIPO60759 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.43■□□□□ 0.86
CYTIPO60759 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CYTIPO60759 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYTIPO60759 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.42■□□□□ 0.86
CYTIPO60759 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.42■□□□□ 0.86
CYTIPO60759 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.42■□□□□ 0.86
CYTIPO60759 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CYTIPO60759 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CYTIPO60759 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.42■□□□□ 0.86
CYTIPO60759 MIR6724-1-201ENST00000616420 92 ntBASIC20.42■□□□□ 0.86
CYTIPO60759 MIR6724-2-201ENST00000616483 92 ntBASIC20.42■□□□□ 0.86
CYTIPO60759 MIR6724-4-201ENST00000617390 92 ntBASIC20.42■□□□□ 0.86
CYTIPO60759 MIR6724-3-201ENST00000622482 92 ntBASIC20.42■□□□□ 0.86
CYTIPO60759 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYTIPO60759 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.42■□□□□ 0.86
CYTIPO60759 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYTIPO60759 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYTIPO60759 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYTIPO60759 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CYTIPO60759 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CYTIPO60759 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYTIPO60759 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CYTIPO60759 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.41■□□□□ 0.86
CYTIPO60759 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CYTIPO60759 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYTIPO60759 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CYTIPO60759 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CYTIPO60759 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.4■□□□□ 0.86
CYTIPO60759 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CYTIPO60759 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.4■□□□□ 0.86
CYTIPO60759 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYTIPO60759 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CYTIPO60759 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CYTIPO60759 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYTIPO60759 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYTIPO60759 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CYTIPO60759 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CYTIPO60759 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CYTIPO60759 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.39■□□□□ 0.85
CYTIPO60759 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.39■□□□□ 0.85
CYTIPO60759 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CYTIPO60759 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYTIPO60759 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CYTIPO60759 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYTIPO60759 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.38■□□□□ 0.85
CYTIPO60759 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.38■□□□□ 0.85
CYTIPO60759 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CYTIPO60759 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.38■□□□□ 0.85
CYTIPO60759 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
CYTIPO60759 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYTIPO60759 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYTIPO60759 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.37■□□□□ 0.85
CYTIPO60759 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYTIPO60759 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.37■□□□□ 0.85
CYTIPO60759 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYTIPO60759 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CYTIPO60759 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
CYTIPO60759 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CYTIPO60759 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.37■□□□□ 0.85
CYTIPO60759 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.37■□□□□ 0.85
CYTIPO60759 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYTIPO60759 ALDH1A3-203ENST00000557963 1670 ntBASIC20.36■□□□□ 0.85
CYTIPO60759 AC005703.6-201ENST00000623265 1329 ntBASIC20.36■□□□□ 0.85
CYTIPO60759 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYTIPO60759 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYTIPO60759 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYTIPO60759 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CYTIPO60759 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CYTIPO60759 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYTIPO60759 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYTIPO60759 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CYTIPO60759 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYTIPO60759 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.35■□□□□ 0.85
CYTIPO60759 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.35■□□□□ 0.85
CYTIPO60759 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.35■□□□□ 0.85
CYTIPO60759 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CYTIPO60759 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYTIPO60759 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CYTIPO60759 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CYTIPO60759 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.34■□□□□ 0.85
CYTIPO60759 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.34■□□□□ 0.85
CYTIPO60759 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CYTIPO60759 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CYTIPO60759 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CYTIPO60759 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
CYTIPO60759 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.33■□□□□ 0.85
CYTIPO60759 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CYTIPO60759 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CYTIPO60759 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms