Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 AL136162.1-201ENST00000607711 1078 ntBASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 MIR6089-201ENST00000616698 64 ntBASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LEMD3Q9Y2U8 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LEMD3Q9Y2U8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LEMD3Q9Y2U8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LEMD3Q9Y2U8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC28.34■■■□□ 2.13
LEMD3Q9Y2U8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LEMD3Q9Y2U8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
LEMD3Q9Y2U8 AL031432.3-201ENST00000607698 485 ntBASIC28.32■■■□□ 2.12
LEMD3Q9Y2U8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.32■■■□□ 2.12
LEMD3Q9Y2U8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.32■■■□□ 2.12
LEMD3Q9Y2U8 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LEMD3Q9Y2U8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 AC135279.3-201ENST00000610945 1311 ntBASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LEMD3Q9Y2U8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LEMD3Q9Y2U8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
LEMD3Q9Y2U8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LEMD3Q9Y2U8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.3■■■□□ 2.12
LEMD3Q9Y2U8 SUDS3P1-201ENST00000505831 966 ntBASIC28.3■■■□□ 2.12
LEMD3Q9Y2U8 AC142381.2-201ENST00000566120 298 ntBASIC28.3■■■□□ 2.12
LEMD3Q9Y2U8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.29■■■□□ 2.12
LEMD3Q9Y2U8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
LEMD3Q9Y2U8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.28■■■□□ 2.12
LEMD3Q9Y2U8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
LEMD3Q9Y2U8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LEMD3Q9Y2U8 AC024257.2-201ENST00000549699 147 ntBASIC28.28■■■□□ 2.12
LEMD3Q9Y2U8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
LEMD3Q9Y2U8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
LEMD3Q9Y2U8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LEMD3Q9Y2U8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LEMD3Q9Y2U8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.27■■■□□ 2.12
LEMD3Q9Y2U8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
LEMD3Q9Y2U8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 EDA-201ENST00000338901 1233 ntBASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.26■■■□□ 2.11
LEMD3Q9Y2U8 AC091060.1-201ENST00000623524 1766 ntBASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 DUX4L19-201ENST00000557448 1267 ntBASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
LEMD3Q9Y2U8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
LEMD3Q9Y2U8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 ZNRF2P3-201ENST00000424200 374 ntBASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 AL355001.2-201ENST00000620617 1191 ntBASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 AC145676.1-201ENST00000514988 2004 ntBASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.23■■■□□ 2.11
LEMD3Q9Y2U8 AL022069.1-201ENST00000568025 1636 ntBASIC28.22■■■□□ 2.11
LEMD3Q9Y2U8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
LEMD3Q9Y2U8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.22■■■□□ 2.11
LEMD3Q9Y2U8 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.22■■■□□ 2.11
LEMD3Q9Y2U8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.22■■■□□ 2.11
LEMD3Q9Y2U8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms