Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
KRTAP4-1Q9BYQ7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 AC097381.1-201ENST00000429019 1296 ntBASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 AL162430.1-201ENST00000480705 870 ntBASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KRTAP4-1Q9BYQ7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 CA15P2-201ENST00000611168 834 ntBASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 AC131274.2-201ENST00000580697 1507 ntBASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
KRTAP4-1Q9BYQ7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC091305.1-201ENST00000479476 895 ntBASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC099791.2-201ENST00000605725 427 ntBASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
KRTAP4-1Q9BYQ7 SYT6-210ENST00000641643 1587 ntBASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC005703.6-201ENST00000623265 1329 ntBASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC12.13□□□□□ -0.47
KRTAP4-1Q9BYQ7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 PTCHD3P2-201ENST00000424937 1205 ntBASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 SF1-220ENST00000626028 704 ntTSL 2 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC010501.1-201ENST00000606270 1962 ntBASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC12.12□□□□□ -0.47
KRTAP4-1Q9BYQ7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 RASA4CP-201ENST00000424092 1398 ntBASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 REST-206ENST00000612429 1376 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 REST-207ENST00000616975 1370 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 AC008764.7-201ENST00000593779 1081 ntBASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC12.11□□□□□ -0.47
KRTAP4-1Q9BYQ7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms