Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV23-1A0A0A0MS06 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV23-1A0A0A0MS06 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
TRBV23-1A0A0A0MS06 THA1P-201ENST00000590384 1145 ntBASIC19.38■□□□□ 0.69
TRBV23-1A0A0A0MS06 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC079834.2-201ENST00000609776 1949 ntBASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC090877.2-201ENST00000558441 1738 ntBASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV23-1A0A0A0MS06 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 RARRES2P1-201ENST00000474487 481 ntBASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC120024.1-201ENST00000562672 995 ntBASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 AL031848.2-201ENST00000607670 837 ntBASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV23-1A0A0A0MS06 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC103724.3-201ENST00000564481 992 ntBASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC142381.3-201ENST00000568208 1670 ntBASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC022211.4-201ENST00000625094 2161 ntBASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC012676.1-201ENST00000574705 1949 ntBASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV23-1A0A0A0MS06 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV23-1A0A0A0MS06 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
TRBV23-1A0A0A0MS06 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV23-1A0A0A0MS06 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 AL024507.2-201ENST00000606070 2574 ntBASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 AP003733.4-201ENST00000623785 1697 ntBASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV23-1A0A0A0MS06 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV23-1A0A0A0MS06 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRBV23-1A0A0A0MS06 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRBV23-1A0A0A0MS06 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms