Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
HIPK3Q9H422 AC004448.1-201ENST00000458332 883 ntBASIC25.63■■□□□ 1.69
HIPK3Q9H422 AC091305.1-201ENST00000479476 895 ntBASIC25.63■■□□□ 1.69
HIPK3Q9H422 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.63■■□□□ 1.69
HIPK3Q9H422 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.63■■□□□ 1.69
HIPK3Q9H422 MIR6821-201ENST00000617625 74 ntBASIC25.63■■□□□ 1.69
HIPK3Q9H422 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HIPK3Q9H422 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.63■■□□□ 1.69
HIPK3Q9H422 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
HIPK3Q9H422 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HIPK3Q9H422 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
HIPK3Q9H422 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HIPK3Q9H422 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.62■■□□□ 1.69
HIPK3Q9H422 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.62■■□□□ 1.69
HIPK3Q9H422 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
HIPK3Q9H422 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
HIPK3Q9H422 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.62■■□□□ 1.69
HIPK3Q9H422 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
HIPK3Q9H422 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.61■■□□□ 1.69
HIPK3Q9H422 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
HIPK3Q9H422 AC005703.6-201ENST00000623265 1329 ntBASIC25.61■■□□□ 1.69
HIPK3Q9H422 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
HIPK3Q9H422 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.6■■□□□ 1.69
HIPK3Q9H422 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.6■■□□□ 1.69
HIPK3Q9H422 SYT6-210ENST00000641643 1587 ntBASIC25.6■■□□□ 1.69
HIPK3Q9H422 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HIPK3Q9H422 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
HIPK3Q9H422 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HIPK3Q9H422 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HIPK3Q9H422 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HIPK3Q9H422 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
HIPK3Q9H422 AC097381.1-201ENST00000429019 1296 ntBASIC25.59■■□□□ 1.69
HIPK3Q9H422 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
HIPK3Q9H422 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
HIPK3Q9H422 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
HIPK3Q9H422 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
HIPK3Q9H422 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HIPK3Q9H422 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.58■■□□□ 1.69
HIPK3Q9H422 MIR4767-201ENST00000582827 78 ntBASIC25.58■■□□□ 1.69
HIPK3Q9H422 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.58■■□□□ 1.69
HIPK3Q9H422 AC092171.4-201ENST00000609130 632 ntBASIC25.57■■□□□ 1.68
HIPK3Q9H422 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HIPK3Q9H422 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HIPK3Q9H422 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.57■■□□□ 1.68
HIPK3Q9H422 AC142086.6-201ENST00000621154 1765 ntBASIC25.56■■□□□ 1.68
HIPK3Q9H422 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
HIPK3Q9H422 AC097639.1-201ENST00000565519 1891 ntBASIC25.56■■□□□ 1.68
HIPK3Q9H422 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
HIPK3Q9H422 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
HIPK3Q9H422 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HIPK3Q9H422 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.55■■□□□ 1.68
HIPK3Q9H422 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
HIPK3Q9H422 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.54■■□□□ 1.68
HIPK3Q9H422 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
HIPK3Q9H422 AC087623.3-201ENST00000607047 1098 ntBASIC25.54■■□□□ 1.68
HIPK3Q9H422 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.54■■□□□ 1.68
HIPK3Q9H422 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
HIPK3Q9H422 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
HIPK3Q9H422 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
HIPK3Q9H422 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
HIPK3Q9H422 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
HIPK3Q9H422 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.53■■□□□ 1.68
HIPK3Q9H422 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.53■■□□□ 1.68
HIPK3Q9H422 CA15P2-201ENST00000611168 834 ntBASIC25.53■■□□□ 1.68
HIPK3Q9H422 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
HIPK3Q9H422 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.53■■□□□ 1.68
HIPK3Q9H422 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HIPK3Q9H422 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
HIPK3Q9H422 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.52■■□□□ 1.68
HIPK3Q9H422 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HIPK3Q9H422 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
HIPK3Q9H422 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HIPK3Q9H422 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.52■■□□□ 1.68
HIPK3Q9H422 RASA4CP-201ENST00000424092 1398 ntBASIC25.52■■□□□ 1.68
HIPK3Q9H422 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
HIPK3Q9H422 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.51■■□□□ 1.67
HIPK3Q9H422 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HIPK3Q9H422 AL162430.1-201ENST00000480705 870 ntBASIC25.51■■□□□ 1.67
HIPK3Q9H422 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
HIPK3Q9H422 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.51■■□□□ 1.67
HIPK3Q9H422 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HIPK3Q9H422 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HIPK3Q9H422 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
HIPK3Q9H422 AC096887.2-201ENST00000623443 1957 ntBASIC25.51■■□□□ 1.67
HIPK3Q9H422 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.51■■□□□ 1.67
HIPK3Q9H422 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HIPK3Q9H422 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
HIPK3Q9H422 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.5■■□□□ 1.67
HIPK3Q9H422 SERBP1P1-201ENST00000396021 1160 ntBASIC25.5■■□□□ 1.67
HIPK3Q9H422 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.5■■□□□ 1.67
HIPK3Q9H422 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HIPK3Q9H422 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HIPK3Q9H422 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
HIPK3Q9H422 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms