Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 DUX4L19-201ENST00000557448 1267 ntBASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.97■□□□□ 0.15
ALMS1Q8TCU4 AC142472.1-201ENST00000612013 1741 ntBASIC15.96■□□□□ 0.15
ALMS1Q8TCU4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ALMS1Q8TCU4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ALMS1Q8TCU4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ALMS1Q8TCU4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ALMS1Q8TCU4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ALMS1Q8TCU4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.96■□□□□ 0.14
ALMS1Q8TCU4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.96■□□□□ 0.14
ALMS1Q8TCU4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.96■□□□□ 0.14
ALMS1Q8TCU4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 MIR6722-201ENST00000617286 78 ntBASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ALMS1Q8TCU4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 HLA-L-209ENST00000420110 1011 ntBASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 AC136469.2-201ENST00000623944 1028 ntBASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.94■□□□□ 0.14
ALMS1Q8TCU4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 AC011298.3-201ENST00000615796 283 ntBASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.93■□□□□ 0.14
ALMS1Q8TCU4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 AC090877.2-201ENST00000558441 1738 ntBASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 AC005703.6-201ENST00000623265 1329 ntBASIC15.92■□□□□ 0.14
ALMS1Q8TCU4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 C17orf82-201ENST00000623772 1530 ntBASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ALMS1Q8TCU4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 AL137784.2-201ENST00000607332 1000 ntBASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 TSPY26P-201ENST00000476365 1326 ntBASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 ABCB10P1-201ENST00000614297 2181 ntBASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 AC008764.7-201ENST00000593779 1081 ntBASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC15.9■□□□□ 0.14
ALMS1Q8TCU4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 AC233992.3-201ENST00000607491 485 ntBASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
ALMS1Q8TCU4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms