Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC30Q5VVM6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC29.8■■■□□ 2.36
CCDC30Q5VVM6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CCDC30Q5VVM6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC30Q5VVM6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC30Q5VVM6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC30Q5VVM6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC30Q5VVM6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC29.79■■■□□ 2.36
CCDC30Q5VVM6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
CCDC30Q5VVM6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC30Q5VVM6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
CCDC30Q5VVM6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.77■■■□□ 2.36
CCDC30Q5VVM6 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.77■■■□□ 2.36
CCDC30Q5VVM6 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
CCDC30Q5VVM6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC30Q5VVM6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CCDC30Q5VVM6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 KRT16P3-201ENST00000439127 1283 ntBASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC30Q5VVM6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC30Q5VVM6 AC020928.2-201ENST00000588717 2197 ntBASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC30Q5VVM6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 SNX5-217ENST00000606557 1087 ntBASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC30Q5VVM6 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 AC010997.5-201ENST00000609182 354 ntBASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC30Q5VVM6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC30Q5VVM6 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC30Q5VVM6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
CCDC30Q5VVM6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC29.7■■■□□ 2.35
CCDC30Q5VVM6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
CCDC30Q5VVM6 MTDHP2-201ENST00000601468 714 ntBASIC29.7■■■□□ 2.35
CCDC30Q5VVM6 AP003733.4-201ENST00000623785 1697 ntBASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 AC131212.1-201ENST00000613771 668 ntBASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 AC142381.3-201ENST00000568208 1670 ntBASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC29.69■■■□□ 2.34
CCDC30Q5VVM6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC29.68■■■□□ 2.34
CCDC30Q5VVM6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC30Q5VVM6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms