Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC021231.2-201ENST00000594613 730 ntBASIC19.48■□□□□ 0.71
VAMP1P23763 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
VAMP1P23763 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
VAMP1P23763 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.47■□□□□ 0.71
VAMP1P23763 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.47■□□□□ 0.71
VAMP1P23763 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.47■□□□□ 0.71
VAMP1P23763 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.47■□□□□ 0.71
VAMP1P23763 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
VAMP1P23763 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
VAMP1P23763 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAMP1P23763 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VAMP1P23763 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
VAMP1P23763 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAMP1P23763 AC044849.2-201ENST00000606596 710 ntBASIC19.46■□□□□ 0.71
VAMP1P23763 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAMP1P23763 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.46■□□□□ 0.71
VAMP1P23763 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VAMP1P23763 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.45■□□□□ 0.7
VAMP1P23763 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAMP1P23763 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VAMP1P23763 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAMP1P23763 BOD1-206ENST00000480951 814 ntTSL 2 BASIC19.45■□□□□ 0.7
VAMP1P23763 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAMP1P23763 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VAMP1P23763 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
VAMP1P23763 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.45■□□□□ 0.7
VAMP1P23763 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
VAMP1P23763 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC19.44■□□□□ 0.7
VAMP1P23763 AC008813.1-201ENST00000536597 885 ntBASIC19.44■□□□□ 0.7
VAMP1P23763 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.44■□□□□ 0.7
VAMP1P23763 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
VAMP1P23763 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VAMP1P23763 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.43■□□□□ 0.7
VAMP1P23763 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VAMP1P23763 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VAMP1P23763 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VAMP1P23763 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VAMP1P23763 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAMP1P23763 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAMP1P23763 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.43■□□□□ 0.7
VAMP1P23763 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VAMP1P23763 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VAMP1P23763 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.42■□□□□ 0.7
VAMP1P23763 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.42■□□□□ 0.7
VAMP1P23763 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAMP1P23763 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAMP1P23763 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAMP1P23763 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAMP1P23763 DUX4L29-201ENST00000425409 679 ntBASIC19.42■□□□□ 0.7
VAMP1P23763 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VAMP1P23763 AC148477.6-201ENST00000623746 465 ntBASIC19.42■□□□□ 0.7
VAMP1P23763 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VAMP1P23763 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VAMP1P23763 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.42■□□□□ 0.7
VAMP1P23763 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.41■□□□□ 0.7
VAMP1P23763 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.41■□□□□ 0.7
VAMP1P23763 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 MIR6089-201ENST00000616698 64 ntBASIC19.41■□□□□ 0.7
VAMP1P23763 AC233723.2-201ENST00000623798 2106 ntBASIC19.41■□□□□ 0.7
VAMP1P23763 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
VAMP1P23763 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VAMP1P23763 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VAMP1P23763 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.41■□□□□ 0.7
VAMP1P23763 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
VAMP1P23763 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VAMP1P23763 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.4■□□□□ 0.7
VAMP1P23763 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VAMP1P23763 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAMP1P23763 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.4■□□□□ 0.7
VAMP1P23763 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VAMP1P23763 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.4■□□□□ 0.7
VAMP1P23763 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
VAMP1P23763 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
VAMP1P23763 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VAMP1P23763 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VAMP1P23763 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.39■□□□□ 0.7
VAMP1P23763 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
VAMP1P23763 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms