Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 AL592295.1-201ENST00000400984 884 ntBASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV1A0A0A0MS02 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV1A0A0A0MS02 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.77■□□□□ 0.28
TRGV1A0A0A0MS02 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV1A0A0A0MS02 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.77■□□□□ 0.28
TRGV1A0A0A0MS02 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV1A0A0A0MS02 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV1A0A0A0MS02 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV1A0A0A0MS02 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV1A0A0A0MS02 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV1A0A0A0MS02 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC16.77■□□□□ 0.27
TRGV1A0A0A0MS02 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV1A0A0A0MS02 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV1A0A0A0MS02 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 AC004987.1-201ENST00000428627 508 ntBASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 ATP5G2P3-201ENST00000429083 425 ntBASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV1A0A0A0MS02 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV1A0A0A0MS02 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV1A0A0A0MS02 LONRF2P2-201ENST00000439212 571 ntBASIC16.75■□□□□ 0.27
TRGV1A0A0A0MS02 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.75■□□□□ 0.27
TRGV1A0A0A0MS02 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.75■□□□□ 0.27
TRGV1A0A0A0MS02 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRGV1A0A0A0MS02 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 TSPY13P-201ENST00000338964 914 ntBASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRGV1A0A0A0MS02 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 AC012354.3-201ENST00000623734 483 ntBASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRGV1A0A0A0MS02 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 HLA-L-211ENST00000482052 1765 ntBASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRGV1A0A0A0MS02 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 AC090877.2-201ENST00000558441 1738 ntBASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.71■□□□□ 0.27
TRGV1A0A0A0MS02 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRGV1A0A0A0MS02 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRGV1A0A0A0MS02 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 LINC00543-201ENST00000567234 1845 ntBASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.7■□□□□ 0.26
TRGV1A0A0A0MS02 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 AC141586.4-201ENST00000624558 1573 ntBASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRGV1A0A0A0MS02 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms