Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NKX6-2Q9C056 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX6-2Q9C056 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NKX6-2Q9C056 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NKX6-2Q9C056 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 DUSP8P3-201ENST00000399571 1760 ntBASIC18.82■□□□□ 0.6
NKX6-2Q9C056 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.82■□□□□ 0.6
NKX6-2Q9C056 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
NKX6-2Q9C056 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 FOXO3B-201ENST00000395675 1928 ntBASIC18.8■□□□□ 0.6
NKX6-2Q9C056 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NKX6-2Q9C056 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.79■□□□□ 0.6
NKX6-2Q9C056 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 AC108673.1-201ENST00000510422 1159 ntBASIC18.78■□□□□ 0.6
NKX6-2Q9C056 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NKX6-2Q9C056 AC092667.1-201ENST00000434301 2586 ntBASIC18.78■□□□□ 0.6
NKX6-2Q9C056 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-2Q9C056 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NKX6-2Q9C056 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NKX6-2Q9C056 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NKX6-2Q9C056 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NKX6-2Q9C056 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 CAHM-201ENST00000604200 896 ntBASIC18.76■□□□□ 0.59
NKX6-2Q9C056 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NKX6-2Q9C056 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NKX6-2Q9C056 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 MIR762-201ENST00000390236 83 ntBASIC18.74■□□□□ 0.59
NKX6-2Q9C056 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX6-2Q9C056 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX6-2Q9C056 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms