Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CHD5Q8TDI0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CHD5Q8TDI0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD5Q8TDI0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.86■■□□□ 1.41
CHD5Q8TDI0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.85■■□□□ 1.41
CHD5Q8TDI0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CHD5Q8TDI0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD5Q8TDI0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CHD5Q8TDI0 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.85■■□□□ 1.41
CHD5Q8TDI0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 BX664725.1-201ENST00000438252 379 ntBASIC23.84■■□□□ 1.41
CHD5Q8TDI0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CHD5Q8TDI0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD5Q8TDI0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CHD5Q8TDI0 AC138932.3-201ENST00000567634 1902 ntBASIC23.83■■□□□ 1.41
CHD5Q8TDI0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.83■■□□□ 1.41
CHD5Q8TDI0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHD5Q8TDI0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CHD5Q8TDI0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD5Q8TDI0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD5Q8TDI0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD5Q8TDI0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHD5Q8TDI0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
CHD5Q8TDI0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.82■■□□□ 1.4
CHD5Q8TDI0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.81■■□□□ 1.4
CHD5Q8TDI0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 AP003733.4-201ENST00000623785 1697 ntBASIC23.8■■□□□ 1.4
CHD5Q8TDI0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.8■■□□□ 1.4
CHD5Q8TDI0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD5Q8TDI0 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.79■■□□□ 1.4
CHD5Q8TDI0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.79■■□□□ 1.4
CHD5Q8TDI0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHD5Q8TDI0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 SNX5-217ENST00000606557 1087 ntBASIC23.78■■□□□ 1.4
CHD5Q8TDI0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 AC021242.3-201ENST00000607598 1377 ntBASIC23.78■■□□□ 1.4
CHD5Q8TDI0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 GUSBP5-201ENST00000418136 578 ntBASIC23.78■■□□□ 1.4
CHD5Q8TDI0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.78■■□□□ 1.4
CHD5Q8TDI0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 AC142381.3-201ENST00000568208 1670 ntBASIC23.77■■□□□ 1.4
CHD5Q8TDI0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHD5Q8TDI0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 AC131274.2-201ENST00000580697 1507 ntBASIC23.76■■□□□ 1.39
CHD5Q8TDI0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHD5Q8TDI0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHD5Q8TDI0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.74■■□□□ 1.39
CHD5Q8TDI0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.74■■□□□ 1.39
CHD5Q8TDI0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD5Q8TDI0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD5Q8TDI0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CHD5Q8TDI0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CHD5Q8TDI0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms