Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TPM3P06753 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TPM3P06753 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.06■■□□□ 1.76
TPM3P06753 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.06■■□□□ 1.76
TPM3P06753 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.06■■□□□ 1.76
TPM3P06753 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TPM3P06753 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TPM3P06753 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TPM3P06753 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TPM3P06753 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.05■■□□□ 1.76
TPM3P06753 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.05■■□□□ 1.76
TPM3P06753 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.05■■□□□ 1.76
TPM3P06753 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
TPM3P06753 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TPM3P06753 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
TPM3P06753 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TPM3P06753 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
TPM3P06753 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TPM3P06753 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TPM3P06753 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TPM3P06753 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TPM3P06753 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
TPM3P06753 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TPM3P06753 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.02■■□□□ 1.76
TPM3P06753 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TPM3P06753 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TPM3P06753 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TPM3P06753 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
TPM3P06753 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
TPM3P06753 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26■■□□□ 1.75
TPM3P06753 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26■■□□□ 1.75
TPM3P06753 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26■■□□□ 1.75
TPM3P06753 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26■■□□□ 1.75
TPM3P06753 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TPM3P06753 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26■■□□□ 1.75
TPM3P06753 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TPM3P06753 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
TPM3P06753 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.99■■□□□ 1.75
TPM3P06753 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.99■■□□□ 1.75
TPM3P06753 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TPM3P06753 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TPM3P06753 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
TPM3P06753 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.98■■□□□ 1.75
TPM3P06753 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.98■■□□□ 1.75
TPM3P06753 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.98■■□□□ 1.75
TPM3P06753 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TPM3P06753 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.98■■□□□ 1.75
TPM3P06753 C9orf163-202ENST00000624034 2573 ntBASIC25.98■■□□□ 1.75
TPM3P06753 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TPM3P06753 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
TPM3P06753 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
TPM3P06753 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TPM3P06753 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TPM3P06753 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TPM3P06753 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
TPM3P06753 ABCB10P4-201ENST00000566803 2184 ntBASIC25.97■■□□□ 1.75
TPM3P06753 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.97■■□□□ 1.75
TPM3P06753 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.97■■□□□ 1.75
TPM3P06753 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TPM3P06753 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TPM3P06753 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TPM3P06753 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.96■■□□□ 1.75
TPM3P06753 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.96■■□□□ 1.75
TPM3P06753 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TPM3P06753 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TPM3P06753 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.96■■□□□ 1.75
TPM3P06753 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.96■■□□□ 1.75
TPM3P06753 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
TPM3P06753 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TPM3P06753 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TPM3P06753 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
TPM3P06753 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TPM3P06753 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TPM3P06753 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TPM3P06753 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.95■■□□□ 1.74
TPM3P06753 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
TPM3P06753 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TPM3P06753 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.94■■□□□ 1.74
TPM3P06753 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TPM3P06753 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
TPM3P06753 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.94■■□□□ 1.74
TPM3P06753 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TPM3P06753 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TPM3P06753 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
TPM3P06753 RPS2P35-201ENST00000443417 897 ntBASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms