RNA–Protein interactions for RNA: ENST00000624034.1

C9orf163-202, Transcript of chromosome 9 open reading frame 163, humanhuman

BASIC

Gene C9orf163, Length 2,573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf163-202ENST00000624034 NISCHQ9Y2I1 1504 aa47.64■■■■■ 5.22
C9orf163-202ENST00000624034 CCDC180Q9P1Z9 1646 aa40.63■■■■■ 4.1
C9orf163-202ENST00000624034 SHROOM4Q9ULL8 1493 aa40.45■■■■■ 4.07
C9orf163-202ENST00000624034 ZCCHC6Q5VYS8 1495 aaKnown RBP40.22■■■■■ 4.03
C9orf163-202ENST00000624034 DCAF8L2P0C7V8 631 aa39.7■■■■□ 3.95
C9orf163-202ENST00000624034 SUPT5HO00267 1087 aaKnown RBP39.45■■■■□ 3.91
C9orf163-202ENST00000624034 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
C9orf163-202ENST00000624034 CHIC1Q5VXU3 224 aa38.14■■■■□ 3.7
C9orf163-202ENST00000624034 SCRIBQ14160 1630 aa38.13■■■■□ 3.69
C9orf163-202ENST00000624034 ABCC9O60706 1549 aa38.07■■■■□ 3.69
C9orf163-202ENST00000624034 MYO15BQ96JP2 1530 aa38.01■■■■□ 3.67
C9orf163-202ENST00000624034 NACADO15069 1562 aa37.65■■■■□ 3.62
C9orf163-202ENST00000624034 RSF1Q96T23 1441 aaPredicted RBP37.58■■■■□ 3.61
C9orf163-202ENST00000624034 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
C9orf163-202ENST00000624034 RB1CC1Q8TDY2 1594 aa37.17■■■■□ 3.54
C9orf163-202ENST00000624034 MROH2BQ7Z745 1585 aa37.07■■■■□ 3.52
C9orf163-202ENST00000624034 LOC105371045A0A1W2PR82 267 aa37.07■■■■□ 3.52
C9orf163-202ENST00000624034 WIZO95785 1651 aa36.87■■■■□ 3.49
C9orf163-202ENST00000624034 TRIM41Q8WV44 630 aa36.72■■■■□ 3.47
C9orf163-202ENST00000624034 UNC13AQ9UPW8 1703 aa36.7■■■■□ 3.47
C9orf163-202ENST00000624034 PCGF6Q9BYE7 350 aa36.59■■■■□ 3.45
C9orf163-202ENST00000624034 BAZ1AQ9NRL2 1556 aaPredicted RBP36.58■■■■□ 3.45
C9orf163-202ENST00000624034 FAM9AQ8IZU1 332 aaPredicted RBP36.49■■■■□ 3.43
C9orf163-202ENST00000624034 SMARCA4P51532 1647 aa36.38■■■■□ 3.41
C9orf163-202ENST00000624034 PABPN1Q86U42 306 aaKnown RBP eCLIP36.37■■■■□ 3.41
C9orf163-202ENST00000624034 EHMT2Q96KQ7 1210 aa36.25■■■■□ 3.39
C9orf163-202ENST00000624034 HRCP23327 699 aa36.24■■■■□ 3.39
C9orf163-202ENST00000624034 BICRAQ9NZM4 1560 aa36.23■■■■□ 3.39
C9orf163-202ENST00000624034 TOP2AP11388 1531 aaKnown RBP36.2■■■■□ 3.39
C9orf163-202ENST00000624034 EIF4G1Q04637 1599 aaKnown RBP36.16■■■■□ 3.38
C9orf163-202ENST00000624034 CCDC88BA6NC98 1476 aa36.09■■■■□ 3.37
C9orf163-202ENST00000624034 SMARCA2P51531 1590 aa36.03■■■■□ 3.36
C9orf163-202ENST00000624034 ABCC8Q09428 1581 aa35.93■■■■□ 3.34
C9orf163-202ENST00000624034 TRIM26Q12899 539 aaPredicted RBP35.89■■■■□ 3.34
C9orf163-202ENST00000624034 PPARGC1BQ86YN6 1023 aaKnown RBP35.71■■■■□ 3.31
C9orf163-202ENST00000624034 PEG3Q9GZU2 1588 aa35.65■■■■□ 3.3
C9orf163-202ENST00000624034 ATAD2BQ9ULI0 1458 aa35.53■■■■□ 3.28
C9orf163-202ENST00000624034 SOGA1O94964 1423 aa35.5■■■■□ 3.27
C9orf163-202ENST00000624034 BAZ1BQ9UIG0 1483 aaKnown RBP35.4■■■■□ 3.26
C9orf163-202ENST00000624034 RUSC2Q8N2Y8 1516 aa35.37■■■■□ 3.25
C9orf163-202ENST00000624034 WRNQ14191 1432 aaPredicted RBP eCLIP35.28■■■■□ 3.24
C9orf163-202ENST00000624034 CSRNP3Q8WYN3 585 aa35.19■■■■□ 3.22
C9orf163-202ENST00000624034 SYNJ1O43426 1573 aa35.18■■■■□ 3.22
C9orf163-202ENST00000624034 CEP162Q5TB80 1403 aa35.1■■■■□ 3.21
C9orf163-202ENST00000624034 EEA1Q15075 1411 aa35.08■■■■□ 3.21
C9orf163-202ENST00000624034 UBTFP17480 764 aaKnown RBP35.05■■■■□ 3.2
C9orf163-202ENST00000624034 TNIKQ9UKE5 1360 aa35.02■■■■□ 3.2
C9orf163-202ENST00000624034 TTBK1Q5TCY1 1321 aaPredicted RBP34.96■■■■□ 3.19
C9orf163-202ENST00000624034 GOLGA3Q08378 1498 aa34.9■■■■□ 3.18
C9orf163-202ENST00000624034 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
C9orf163-202ENST00000624034 HMGXB3Q12766 1538 aa34.82■■■■□ 3.16
C9orf163-202ENST00000624034 ZEB1P37275 1124 aaPredicted RBP34.81■■■■□ 3.16
C9orf163-202ENST00000624034 CEP164Q9UPV0 1460 aa34.74■■■■□ 3.15
C9orf163-202ENST00000624034 TOP2BQ02880 1626 aa34.73■■■■□ 3.15
C9orf163-202ENST00000624034 KIF21BO75037 1637 aa34.69■■■■□ 3.14
C9orf163-202ENST00000624034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.66■■■■□ 3.14
C9orf163-202ENST00000624034 RAPGEF2Q9Y4G8 1499 aa34.63■■■■□ 3.13
C9orf163-202ENST00000624034 BIVM-ERCC5R4GMW8 1640 aa34.6■■■■□ 3.13
C9orf163-202ENST00000624034 RANGAP1P46060 587 aaPredicted RBP34.55■■■■□ 3.12
C9orf163-202ENST00000624034 CUX1P39880 1505 aa34.52■■■■□ 3.12
C9orf163-202ENST00000624034 CLIP1P30622 1438 aa34.52■■■■□ 3.12
C9orf163-202ENST00000624034 CFTRP13569 1480 aa34.51■■■■□ 3.11
C9orf163-202ENST00000624034 CCER1Q8TC90 406 aaPredicted RBP34.46■■■■□ 3.11
C9orf163-202ENST00000624034 VPS8Q8N3P4 1428 aa34.29■■■■□ 3.08
C9orf163-202ENST00000624034 PRXQ9BXM0 1461 aa34.28■■■■□ 3.08
C9orf163-202ENST00000624034 CC2D2AQ9P2K1 1620 aa34.26■■■■□ 3.08
C9orf163-202ENST00000624034 KIF27Q86VH2 1401 aa34.2■■■■□ 3.07
C9orf163-202ENST00000624034 CADPSQ9ULU8 1353 aa34.2■■■■□ 3.06
C9orf163-202ENST00000624034 PRDM2Q13029 1718 aa34.19■■■■□ 3.06
C9orf163-202ENST00000624034 ERICH3Q5RHP9 1530 aa34.19■■■■□ 3.06
C9orf163-202ENST00000624034 APLP2Q06481 763 aa34.09■■■■□ 3.05
C9orf163-202ENST00000624034 HNRNPUL2Q1KMD3 747 aaKnown RBP34.08■■■■□ 3.05
C9orf163-202ENST00000624034 ARAP1Q96P48 1450 aa34.04■■■■□ 3.04
C9orf163-202ENST00000624034 CUX2O14529 1486 aa34.01■■■■□ 3.03
C9orf163-202ENST00000624034 FGD5Q6ZNL6 1462 aa33.96■■■■□ 3.03
C9orf163-202ENST00000624034 IGF1RP08069 1367 aa33.92■■■■□ 3.02
C9orf163-202ENST00000624034 PELP1Q8IZL8 1130 aaKnown RBP33.88■■■■□ 3.01
C9orf163-202ENST00000624034 FANCD2Q9BXW9 1451 aa33.88■■■■□ 3.01
C9orf163-202ENST00000624034 KANK4Q5T7N3 995 aaPredicted RBP33.86■■■■□ 3.01
C9orf163-202ENST00000624034 NESP48681 1621 aa33.86■■■■□ 3.01
C9orf163-202ENST00000624034 ARHGAP35Q9NRY4 1499 aa33.81■■■■□ 3
C9orf163-202ENST00000624034 CARMIL1Q5VZK9 1371 aa33.75■■■□□ 2.99
C9orf163-202ENST00000624034 RAD54L2Q9Y4B4 1467 aa33.71■■■□□ 2.99
C9orf163-202ENST00000624034 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
C9orf163-202ENST00000624034 DNMBPQ6XZF7 1577 aa33.63■■■□□ 2.97
C9orf163-202ENST00000624034 TOPBP1Q92547 1522 aa33.63■■■□□ 2.97
C9orf163-202ENST00000624034 POLA1P09884 1462 aaPredicted RBP33.61■■■□□ 2.97
C9orf163-202ENST00000624034 DIEXFQ68CQ4 756 aaKnown RBP33.54■■■□□ 2.96
C9orf163-202ENST00000624034 ABCA10Q8WWZ4 1543 aa33.5■■■□□ 2.95
C9orf163-202ENST00000624034 P3H3Q8IVL6 736 aa33.49■■■□□ 2.95
C9orf163-202ENST00000624034 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.95
C9orf163-202ENST00000624034 RRBP1Q9P2E9 1410 aaKnown RBP33.43■■■□□ 2.94
C9orf163-202ENST00000624034 LAMC3Q9Y6N6 1575 aa33.43■■■□□ 2.94
C9orf163-202ENST00000624034 ZNF316A6NFI3 1004 aaPredicted RBP33.39■■■□□ 2.94
C9orf163-202ENST00000624034 ITGAEP38570 1179 aa33.35■■■□□ 2.93
C9orf163-202ENST00000624034 TIAM1Q13009 1591 aa33.34■■■□□ 2.93
C9orf163-202ENST00000624034 CCNB3Q8WWL7 1395 aa33.34■■■□□ 2.93
C9orf163-202ENST00000624034 TDRD9Q8NDG6 1382 aaKnown RBP33.31■■■□□ 2.92
C9orf163-202ENST00000624034 DHX57Q6P158 1386 aaKnown RBP33.31■■■□□ 2.92
C9orf163-202ENST00000624034 ATP1B4Q9UN42 357 aaPredicted RBP33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms