Protein–RNA interactions for Protein: Q9Y2W1

THRAP3, Thyroid hormone receptor-associated protein 3, humanhuman

Known RBP Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP3Q9Y2W1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
THRAP3Q9Y2W1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
THRAP3Q9Y2W1 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC31.28■■■□□ 2.6
THRAP3Q9Y2W1 MIR939-201ENST00000401314 82 ntBASIC31.27■■■□□ 2.6
THRAP3Q9Y2W1 AC097381.1-201ENST00000429019 1296 ntBASIC31.27■■■□□ 2.6
THRAP3Q9Y2W1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
THRAP3Q9Y2W1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 AF213884.3-201ENST00000563833 479 ntBASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
THRAP3Q9Y2W1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 GRAMD4P4-201ENST00000613563 1115 ntBASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
THRAP3Q9Y2W1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
THRAP3Q9Y2W1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC31.24■■■□□ 2.59
THRAP3Q9Y2W1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.24■■■□□ 2.59
THRAP3Q9Y2W1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
THRAP3Q9Y2W1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
THRAP3Q9Y2W1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.23■■■□□ 2.59
THRAP3Q9Y2W1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.23■■■□□ 2.59
THRAP3Q9Y2W1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.23■■■□□ 2.59
THRAP3Q9Y2W1 AP004609.3-201ENST00000610705 1884 ntBASIC31.23■■■□□ 2.59
THRAP3Q9Y2W1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
THRAP3Q9Y2W1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
THRAP3Q9Y2W1 AP001330.3-201ENST00000520123 633 ntBASIC31.22■■■□□ 2.59
THRAP3Q9Y2W1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC31.22■■■□□ 2.59
THRAP3Q9Y2W1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC31.22■■■□□ 2.59
THRAP3Q9Y2W1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
THRAP3Q9Y2W1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
THRAP3Q9Y2W1 DUX4L19-201ENST00000557448 1267 ntBASIC31.21■■■□□ 2.59
THRAP3Q9Y2W1 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.21■■■□□ 2.59
THRAP3Q9Y2W1 FOXO3B-201ENST00000395675 1928 ntBASIC31.21■■■□□ 2.59
THRAP3Q9Y2W1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.2■■■□□ 2.59
THRAP3Q9Y2W1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
THRAP3Q9Y2W1 AC091305.1-201ENST00000479476 895 ntBASIC31.2■■■□□ 2.59
THRAP3Q9Y2W1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
THRAP3Q9Y2W1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
THRAP3Q9Y2W1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
THRAP3Q9Y2W1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
THRAP3Q9Y2W1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC31.19■■■□□ 2.58
THRAP3Q9Y2W1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
THRAP3Q9Y2W1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.18■■■□□ 2.58
THRAP3Q9Y2W1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
THRAP3Q9Y2W1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC31.16■■■□□ 2.58
THRAP3Q9Y2W1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
THRAP3Q9Y2W1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC31.16■■■□□ 2.58
THRAP3Q9Y2W1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
THRAP3Q9Y2W1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
THRAP3Q9Y2W1 AC090877.2-201ENST00000558441 1738 ntBASIC31.15■■■□□ 2.58
THRAP3Q9Y2W1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 AC004448.1-201ENST00000458332 883 ntBASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 AL162430.1-201ENST00000480705 870 ntBASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
THRAP3Q9Y2W1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 AC087623.3-201ENST00000607047 1098 ntBASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
THRAP3Q9Y2W1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
THRAP3Q9Y2W1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.12■■■□□ 2.57
THRAP3Q9Y2W1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC31.12■■■□□ 2.57
THRAP3Q9Y2W1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.11■■■□□ 2.57
THRAP3Q9Y2W1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
THRAP3Q9Y2W1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
THRAP3Q9Y2W1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC31.11■■■□□ 2.57
THRAP3Q9Y2W1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
THRAP3Q9Y2W1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
THRAP3Q9Y2W1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
THRAP3Q9Y2W1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
THRAP3Q9Y2W1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.1■■■□□ 2.57
THRAP3Q9Y2W1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
THRAP3Q9Y2W1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
THRAP3Q9Y2W1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
THRAP3Q9Y2W1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms