Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
ALMS1Q8TCU4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.14■□□□□ 0.17
ALMS1Q8TCU4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.14■□□□□ 0.17
ALMS1Q8TCU4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.14■□□□□ 0.17
ALMS1Q8TCU4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
ALMS1Q8TCU4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ALMS1Q8TCU4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 RARRES2P11-201ENST00000635158 484 ntBASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.13■□□□□ 0.17
ALMS1Q8TCU4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 IKBKGP1-201ENST00000612193 1073 ntBASIC16.12■□□□□ 0.17
ALMS1Q8TCU4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 SYT6-210ENST00000641643 1587 ntBASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 IRS3P-201ENST00000223076 1006 ntBASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 SERBP1P1-201ENST00000396021 1160 ntBASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ALMS1Q8TCU4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 AL031602.1-201ENST00000633169 911 ntBASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 AC027682.1-201ENST00000562846 899 ntBASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 AC022517.1-201ENST00000592429 346 ntBASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ALMS1Q8TCU4 MIR4767-201ENST00000582827 78 ntBASIC16.09■□□□□ 0.17
ALMS1Q8TCU4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.09■□□□□ 0.17
ALMS1Q8TCU4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALMS1Q8TCU4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.09■□□□□ 0.17
ALMS1Q8TCU4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ALMS1Q8TCU4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
ALMS1Q8TCU4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
ALMS1Q8TCU4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 AC092437.1-201ENST00000624794 1048 ntBASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.08■□□□□ 0.16
ALMS1Q8TCU4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ALMS1Q8TCU4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ALMS1Q8TCU4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ALMS1Q8TCU4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ALMS1Q8TCU4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ALMS1Q8TCU4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ALMS1Q8TCU4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
ALMS1Q8TCU4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.05■□□□□ 0.16
ALMS1Q8TCU4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms