Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SNAI3Q3KNW1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SNAI3Q3KNW1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.34■□□□□ 0.85
SNAI3Q3KNW1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNAI3Q3KNW1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNAI3Q3KNW1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNAI3Q3KNW1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNAI3Q3KNW1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.33■□□□□ 0.85
SNAI3Q3KNW1 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNAI3Q3KNW1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAI3Q3KNW1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAI3Q3KNW1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 DUX4L18-201ENST00000553347 1267 ntBASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SNAI3Q3KNW1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNAI3Q3KNW1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.29■□□□□ 0.84
SNAI3Q3KNW1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SNAI3Q3KNW1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.29■□□□□ 0.84
SNAI3Q3KNW1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAI3Q3KNW1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAI3Q3KNW1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 HLA-L-211ENST00000482052 1765 ntBASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 LINC00543-201ENST00000567234 1845 ntBASIC20.27■□□□□ 0.84
SNAI3Q3KNW1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
SNAI3Q3KNW1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.27■□□□□ 0.83
SNAI3Q3KNW1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.27■□□□□ 0.83
SNAI3Q3KNW1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 LONRF2P2-201ENST00000439212 571 ntBASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNAI3Q3KNW1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNAI3Q3KNW1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms