Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPB4C9JG80 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPB4C9JG80 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.87■□□□□ 0.93
NPIPB4C9JG80 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NPIPB4C9JG80 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB4C9JG80 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB4C9JG80 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB4C9JG80 LONRF2P2-201ENST00000439212 571 ntBASIC20.86■□□□□ 0.93
NPIPB4C9JG80 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB4C9JG80 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB4C9JG80 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPB4C9JG80 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPB4C9JG80 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB4C9JG80 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
NPIPB4C9JG80 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB4C9JG80 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB4C9JG80 AC019171.1-201ENST00000601251 1056 ntBASIC20.84■□□□□ 0.93
NPIPB4C9JG80 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB4C9JG80 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPB4C9JG80 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.83■□□□□ 0.93
NPIPB4C9JG80 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.83■□□□□ 0.92
NPIPB4C9JG80 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPIPB4C9JG80 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
NPIPB4C9JG80 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NPIPB4C9JG80 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NPIPB4C9JG80 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPIPB4C9JG80 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPB4C9JG80 AC090877.2-201ENST00000558441 1738 ntBASIC20.81■□□□□ 0.92
NPIPB4C9JG80 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPB4C9JG80 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPB4C9JG80 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NPIPB4C9JG80 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 HLA-L-211ENST00000482052 1765 ntBASIC20.8■□□□□ 0.92
NPIPB4C9JG80 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPIPB4C9JG80 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPIPB4C9JG80 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.78■□□□□ 0.92
NPIPB4C9JG80 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.78■□□□□ 0.92
NPIPB4C9JG80 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.78■□□□□ 0.92
NPIPB4C9JG80 AC022616.5-201ENST00000518796 181 ntBASIC20.78■□□□□ 0.92
NPIPB4C9JG80 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPB4C9JG80 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPIPB4C9JG80 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.78■□□□□ 0.92
NPIPB4C9JG80 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPB4C9JG80 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.77■□□□□ 0.92
NPIPB4C9JG80 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPB4C9JG80 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.77■□□□□ 0.92
NPIPB4C9JG80 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPIPB4C9JG80 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NPIPB4C9JG80 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB4C9JG80 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB4C9JG80 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB4C9JG80 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NPIPB4C9JG80 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.76■□□□□ 0.91
NPIPB4C9JG80 AC011551.1-201ENST00000614101 683 ntBASIC20.76■□□□□ 0.91
NPIPB4C9JG80 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms