Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 MIR4508-201ENST00000584178 70 ntBASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.78■□□□□ 0.6
TCRBV4S1A1TA0A5B7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TCRBV4S1A1TA0A5B7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TCRBV4S1A1TA0A5B7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 AC019171.1-201ENST00000601251 1056 ntBASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.75■□□□□ 0.59
TCRBV4S1A1TA0A5B7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 AC009299.2-201ENST00000482477 511 ntBASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 AL031848.2-201ENST00000607670 837 ntBASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.74■□□□□ 0.59
TCRBV4S1A1TA0A5B7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.73■□□□□ 0.59
TCRBV4S1A1TA0A5B7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.72■□□□□ 0.59
TCRBV4S1A1TA0A5B7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV4S1A1TA0A5B7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV4S1A1TA0A5B7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV4S1A1TA0A5B7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TCRBV4S1A1TA0A5B7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 LONRF2P2-201ENST00000439212 571 ntBASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 AC103724.3-201ENST00000564481 992 ntBASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TCRBV4S1A1TA0A5B7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TCRBV4S1A1TA0A5B7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TCRBV4S1A1TA0A5B7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.69■□□□□ 0.58
TCRBV4S1A1TA0A5B7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms