Protein–RNA interactions for Protein: Q9UGL9

CRCT1, Cysteine-rich C-terminal protein 1, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRCT1Q9UGL9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC14.34□□□□□ -0.11
CRCT1Q9UGL9 AC136428.2-201ENST00000563187 214 ntBASIC14.33□□□□□ -0.12
CRCT1Q9UGL9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CRCT1Q9UGL9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CRCT1Q9UGL9 AL162393.1-201ENST00000437852 946 ntBASIC14.27□□□□□ -0.13
CRCT1Q9UGL9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CRCT1Q9UGL9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC14.27□□□□□ -0.13
CRCT1Q9UGL9 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CRCT1Q9UGL9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CRCT1Q9UGL9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CRCT1Q9UGL9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CRCT1Q9UGL9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC14.24□□□□□ -0.13
CRCT1Q9UGL9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC14.21□□□□□ -0.13
CRCT1Q9UGL9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.21□□□□□ -0.13
CRCT1Q9UGL9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC14.2□□□□□ -0.14
CRCT1Q9UGL9 AL031258.1-201ENST00000623562 325 ntBASIC14.2□□□□□ -0.14
CRCT1Q9UGL9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC14.19□□□□□ -0.14
CRCT1Q9UGL9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CRCT1Q9UGL9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CRCT1Q9UGL9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC14.17□□□□□ -0.14
CRCT1Q9UGL9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CRCT1Q9UGL9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC14.17□□□□□ -0.14
CRCT1Q9UGL9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC14.17□□□□□ -0.14
CRCT1Q9UGL9 SETD8P1-201ENST00000623146 1180 ntBASIC14.16□□□□□ -0.14
CRCT1Q9UGL9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CRCT1Q9UGL9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CRCT1Q9UGL9 AP006261.1-201ENST00000584783 668 ntBASIC14.14□□□□□ -0.15
CRCT1Q9UGL9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.13□□□□□ -0.15
CRCT1Q9UGL9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC14.12□□□□□ -0.15
CRCT1Q9UGL9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CRCT1Q9UGL9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC14.12□□□□□ -0.15
CRCT1Q9UGL9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CRCT1Q9UGL9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC14.11□□□□□ -0.15
CRCT1Q9UGL9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CRCT1Q9UGL9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CRCT1Q9UGL9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC14.04□□□□□ -0.16
CRCT1Q9UGL9 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CRCT1Q9UGL9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.01□□□□□ -0.17
CRCT1Q9UGL9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14□□□□□ -0.17
CRCT1Q9UGL9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CRCT1Q9UGL9 HSD17B1P1-201ENST00000590052 955 ntBASIC14□□□□□ -0.17
CRCT1Q9UGL9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC13.99□□□□□ -0.17
CRCT1Q9UGL9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC13.99□□□□□ -0.17
CRCT1Q9UGL9 MIR4449-201ENST00000578365 66 ntBASIC13.99□□□□□ -0.17
CRCT1Q9UGL9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC13.98□□□□□ -0.17
CRCT1Q9UGL9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC13.98□□□□□ -0.17
CRCT1Q9UGL9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC13.97□□□□□ -0.17
CRCT1Q9UGL9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC13.97□□□□□ -0.17
CRCT1Q9UGL9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CRCT1Q9UGL9 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CRCT1Q9UGL9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC13.95□□□□□ -0.18
CRCT1Q9UGL9 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
CRCT1Q9UGL9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CRCT1Q9UGL9 AC019069.1-201ENST00000610008 1333 ntBASIC13.92□□□□□ -0.18
CRCT1Q9UGL9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CRCT1Q9UGL9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC13.9□□□□□ -0.18
CRCT1Q9UGL9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC13.9□□□□□ -0.18
CRCT1Q9UGL9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC13.9□□□□□ -0.18
CRCT1Q9UGL9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CRCT1Q9UGL9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CRCT1Q9UGL9 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC13.88□□□□□ -0.19
CRCT1Q9UGL9 CAHM-201ENST00000604200 896 ntBASIC13.88□□□□□ -0.19
CRCT1Q9UGL9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CRCT1Q9UGL9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CRCT1Q9UGL9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CRCT1Q9UGL9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC13.85□□□□□ -0.19
CRCT1Q9UGL9 ZNRF2P2-203ENST00000454624 420 ntBASIC13.85□□□□□ -0.19
CRCT1Q9UGL9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.85□□□□□ -0.19
CRCT1Q9UGL9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CRCT1Q9UGL9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CRCT1Q9UGL9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CRCT1Q9UGL9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC13.83□□□□□ -0.2
CRCT1Q9UGL9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CRCT1Q9UGL9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CRCT1Q9UGL9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC13.81□□□□□ -0.2
CRCT1Q9UGL9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC13.8□□□□□ -0.2
CRCT1Q9UGL9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC13.79□□□□□ -0.2
CRCT1Q9UGL9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CRCT1Q9UGL9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC13.78□□□□□ -0.2
CRCT1Q9UGL9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC13.78□□□□□ -0.2
CRCT1Q9UGL9 MIR3665-201ENST00000578708 105 ntBASIC13.78□□□□□ -0.2
CRCT1Q9UGL9 MIR639-201ENST00000384974 98 ntBASIC13.77□□□□□ -0.21
CRCT1Q9UGL9 HNRNPLP2-201ENST00000568980 1570 ntBASIC13.77□□□□□ -0.21
CRCT1Q9UGL9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC13.77□□□□□ -0.21
CRCT1Q9UGL9 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CRCT1Q9UGL9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CRCT1Q9UGL9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
CRCT1Q9UGL9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC13.76□□□□□ -0.21
CRCT1Q9UGL9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CRCT1Q9UGL9 AC087741.3-201ENST00000624270 1347 ntBASIC13.75□□□□□ -0.21
CRCT1Q9UGL9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CRCT1Q9UGL9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CRCT1Q9UGL9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC13.74□□□□□ -0.21
CRCT1Q9UGL9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC13.74□□□□□ -0.21
CRCT1Q9UGL9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CRCT1Q9UGL9 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CRCT1Q9UGL9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC13.73□□□□□ -0.21
CRCT1Q9UGL9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC13.73□□□□□ -0.21
CRCT1Q9UGL9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CRCT1Q9UGL9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms