Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC40.52■■■■■ 4.08
TRPM3Q9HCF6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
TRPM3Q9HCF6 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC40.47■■■■■ 4.07
TRPM3Q9HCF6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC40.47■■■■■ 4.07
TRPM3Q9HCF6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC40.46■■■■■ 4.07
TRPM3Q9HCF6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC40.43■■■■■ 4.06
TRPM3Q9HCF6 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC40.42■■■■■ 4.06
TRPM3Q9HCF6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC40.41■■■■■ 4.06
TRPM3Q9HCF6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC40.39■■■■■ 4.06
TRPM3Q9HCF6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC40.35■■■■■ 4.05
TRPM3Q9HCF6 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC40.35■■■■■ 4.05
TRPM3Q9HCF6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC40.35■■■■■ 4.05
TRPM3Q9HCF6 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC40.34■■■■■ 4.05
TRPM3Q9HCF6 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC40.3■■■■■ 4.04
TRPM3Q9HCF6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC40.3■■■■■ 4.04
TRPM3Q9HCF6 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC40.29■■■■■ 4.04
TRPM3Q9HCF6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC40.25■■■■■ 4.03
TRPM3Q9HCF6 RARRES2P7-201ENST00000567349 469 ntBASIC40.22■■■■■ 4.03
TRPM3Q9HCF6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC40.2■■■■■ 4.03
TRPM3Q9HCF6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC40.19■■■■■ 4.02
TRPM3Q9HCF6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC40.16■■■■■ 4.02
TRPM3Q9HCF6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC40.09■■■■■ 4.01
TRPM3Q9HCF6 AC136428.2-201ENST00000563187 214 ntBASIC40.09■■■■■ 4.01
TRPM3Q9HCF6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC40.08■■■■■ 4.01
TRPM3Q9HCF6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
TRPM3Q9HCF6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC39.99■■■■□ 3.99
TRPM3Q9HCF6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC39.97■■■■□ 3.99
TRPM3Q9HCF6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC39.94■■■■□ 3.98
TRPM3Q9HCF6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC39.94■■■■□ 3.98
TRPM3Q9HCF6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC39.93■■■■□ 3.98
TRPM3Q9HCF6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
TRPM3Q9HCF6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC39.9■■■■□ 3.98
TRPM3Q9HCF6 SUZ12P1-203ENST00000578195 985 ntBASIC39.9■■■■□ 3.98
TRPM3Q9HCF6 AC097358.2-201ENST00000607541 1159 ntBASIC39.83■■■■□ 3.97
TRPM3Q9HCF6 SETD8P1-201ENST00000623146 1180 ntBASIC39.83■■■■□ 3.97
TRPM3Q9HCF6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC39.79■■■■□ 3.96
TRPM3Q9HCF6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.78■■■■□ 3.96
TRPM3Q9HCF6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC39.77■■■■□ 3.96
TRPM3Q9HCF6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
TRPM3Q9HCF6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC39.77■■■■□ 3.96
TRPM3Q9HCF6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
TRPM3Q9HCF6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC39.71■■■■□ 3.95
TRPM3Q9HCF6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC39.71■■■■□ 3.95
TRPM3Q9HCF6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC39.68■■■■□ 3.94
TRPM3Q9HCF6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC39.66■■■■□ 3.94
TRPM3Q9HCF6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC39.66■■■■□ 3.94
TRPM3Q9HCF6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
TRPM3Q9HCF6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC39.65■■■■□ 3.94
TRPM3Q9HCF6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC39.61■■■■□ 3.93
TRPM3Q9HCF6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC39.6■■■■□ 3.93
TRPM3Q9HCF6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC39.57■■■■□ 3.93
TRPM3Q9HCF6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
TRPM3Q9HCF6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC39.53■■■■□ 3.92
TRPM3Q9HCF6 RPS2P35-201ENST00000443417 897 ntBASIC39.52■■■■□ 3.92
TRPM3Q9HCF6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC39.51■■■■□ 3.92
TRPM3Q9HCF6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC39.5■■■■□ 3.91
TRPM3Q9HCF6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC39.48■■■■□ 3.91
TRPM3Q9HCF6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC39.48■■■■□ 3.91
TRPM3Q9HCF6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
TRPM3Q9HCF6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC39.43■■■■□ 3.9
TRPM3Q9HCF6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC39.34■■■■□ 3.89
TRPM3Q9HCF6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC39.33■■■■□ 3.89
TRPM3Q9HCF6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC39.3■■■■□ 3.88
TRPM3Q9HCF6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC39.29■■■■□ 3.88
TRPM3Q9HCF6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
TRPM3Q9HCF6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC39.24■■■■□ 3.87
TRPM3Q9HCF6 AL162393.1-201ENST00000437852 946 ntBASIC39.24■■■■□ 3.87
TRPM3Q9HCF6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC39.22■■■■□ 3.87
TRPM3Q9HCF6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
TRPM3Q9HCF6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
TRPM3Q9HCF6 AC145285.7-201ENST00000614819 1539 ntBASIC39.2■■■■□ 3.87
TRPM3Q9HCF6 CAHM-201ENST00000604200 896 ntBASIC39.13■■■■□ 3.85
TRPM3Q9HCF6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
TRPM3Q9HCF6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
TRPM3Q9HCF6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
TRPM3Q9HCF6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC39.09■■■■□ 3.85
TRPM3Q9HCF6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC39.09■■■■□ 3.85
TRPM3Q9HCF6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC39.07■■■■□ 3.85
TRPM3Q9HCF6 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC39.06■■■■□ 3.84
TRPM3Q9HCF6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC39.06■■■■□ 3.84
TRPM3Q9HCF6 MVK-208ENST00000539696 608 ntTSL 5 BASIC39.06■■■■□ 3.84
TRPM3Q9HCF6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC39.05■■■■□ 3.84
TRPM3Q9HCF6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
TRPM3Q9HCF6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC39.03■■■■□ 3.84
TRPM3Q9HCF6 AL391121.1-201ENST00000607967 1349 ntBASIC39■■■■□ 3.83
TRPM3Q9HCF6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC39■■■■□ 3.83
TRPM3Q9HCF6 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC38.99■■■■□ 3.83
TRPM3Q9HCF6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
TRPM3Q9HCF6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
TRPM3Q9HCF6 AL133380.1-201ENST00000506013 324 ntBASIC38.94■■■■□ 3.82
TRPM3Q9HCF6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
TRPM3Q9HCF6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
TRPM3Q9HCF6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
TRPM3Q9HCF6 HNRNPLP2-201ENST00000568980 1570 ntBASIC38.9■■■■□ 3.82
TRPM3Q9HCF6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
TRPM3Q9HCF6 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC38.88■■■■□ 3.81
TRPM3Q9HCF6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.88■■■■□ 3.81
TRPM3Q9HCF6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
TRPM3Q9HCF6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC38.83■■■■□ 3.81
TRPM3Q9HCF6 AP006261.1-201ENST00000584783 668 ntBASIC38.83■■■■□ 3.81
Retrieved 100 of 98,524 protein–RNA pairs in 7.3 ms