Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
EFCC1Q9HA90 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC34.31■■■■□ 3.08
EFCC1Q9HA90 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC34.31■■■■□ 3.08
EFCC1Q9HA90 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
EFCC1Q9HA90 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
EFCC1Q9HA90 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC34.28■■■■□ 3.08
EFCC1Q9HA90 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC34.27■■■■□ 3.08
EFCC1Q9HA90 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC34.26■■■■□ 3.08
EFCC1Q9HA90 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC34.21■■■■□ 3.07
EFCC1Q9HA90 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC34.18■■■■□ 3.06
EFCC1Q9HA90 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.18■■■■□ 3.06
EFCC1Q9HA90 RARRES2P7-201ENST00000567349 469 ntBASIC34.16■■■■□ 3.06
EFCC1Q9HA90 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC34.15■■■■□ 3.06
EFCC1Q9HA90 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
EFCC1Q9HA90 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
EFCC1Q9HA90 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC34.13■■■■□ 3.05
EFCC1Q9HA90 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC34.09■■■■□ 3.05
EFCC1Q9HA90 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC34.09■■■■□ 3.05
EFCC1Q9HA90 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.02■■■■□ 3.04
EFCC1Q9HA90 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
EFCC1Q9HA90 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.99■■■■□ 3.03
EFCC1Q9HA90 AC097358.2-201ENST00000607541 1159 ntBASIC33.96■■■■□ 3.03
EFCC1Q9HA90 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.93■■■■□ 3.02
EFCC1Q9HA90 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC33.92■■■■□ 3.02
EFCC1Q9HA90 RPS2P35-201ENST00000443417 897 ntBASIC33.89■■■■□ 3.02
EFCC1Q9HA90 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
EFCC1Q9HA90 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC33.81■■■■□ 3
EFCC1Q9HA90 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.8■■■■□ 3
EFCC1Q9HA90 AC136428.2-201ENST00000563187 214 ntBASIC33.78■■■■□ 3
EFCC1Q9HA90 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
EFCC1Q9HA90 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
EFCC1Q9HA90 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC33.74■■■□□ 2.99
EFCC1Q9HA90 SETD8P1-201ENST00000623146 1180 ntBASIC33.74■■■□□ 2.99
EFCC1Q9HA90 SUZ12P1-203ENST00000578195 985 ntBASIC33.73■■■□□ 2.99
EFCC1Q9HA90 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
EFCC1Q9HA90 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.69■■■□□ 2.98
EFCC1Q9HA90 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC33.67■■■□□ 2.98
EFCC1Q9HA90 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
EFCC1Q9HA90 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC33.64■■■□□ 2.98
EFCC1Q9HA90 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC33.62■■■□□ 2.97
EFCC1Q9HA90 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
EFCC1Q9HA90 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC33.57■■■□□ 2.96
EFCC1Q9HA90 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
EFCC1Q9HA90 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
EFCC1Q9HA90 EBPL-203ENST00000378270 579 ntTSL 2 BASIC33.53■■■□□ 2.96
EFCC1Q9HA90 KLF16-203ENST00000592313 508 ntTSL 3 BASIC33.53■■■□□ 2.96
EFCC1Q9HA90 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.52■■■□□ 2.96
EFCC1Q9HA90 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC33.5■■■□□ 2.95
EFCC1Q9HA90 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC33.5■■■□□ 2.95
EFCC1Q9HA90 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
EFCC1Q9HA90 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.48■■■□□ 2.95
EFCC1Q9HA90 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC33.48■■■□□ 2.95
EFCC1Q9HA90 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC33.46■■■□□ 2.95
EFCC1Q9HA90 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
EFCC1Q9HA90 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC33.43■■■□□ 2.94
EFCC1Q9HA90 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC33.42■■■□□ 2.94
EFCC1Q9HA90 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC33.39■■■□□ 2.94
EFCC1Q9HA90 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC33.39■■■□□ 2.94
EFCC1Q9HA90 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
EFCC1Q9HA90 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
EFCC1Q9HA90 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC33.29■■■□□ 2.92
EFCC1Q9HA90 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
EFCC1Q9HA90 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC33.26■■■□□ 2.92
EFCC1Q9HA90 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC33.26■■■□□ 2.91
EFCC1Q9HA90 ILK-212ENST00000532063 1617 ntTSL 2 BASIC33.24■■■□□ 2.91
EFCC1Q9HA90 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
EFCC1Q9HA90 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
EFCC1Q9HA90 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
EFCC1Q9HA90 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
EFCC1Q9HA90 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC33.21■■■□□ 2.91
EFCC1Q9HA90 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
EFCC1Q9HA90 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC33.2■■■□□ 2.91
EFCC1Q9HA90 AL162393.1-201ENST00000437852 946 ntBASIC33.19■■■□□ 2.9
EFCC1Q9HA90 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC33.18■■■□□ 2.9
EFCC1Q9HA90 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC33.17■■■□□ 2.9
EFCC1Q9HA90 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
EFCC1Q9HA90 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
EFCC1Q9HA90 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
EFCC1Q9HA90 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC33.13■■■□□ 2.89
EFCC1Q9HA90 AP006261.1-201ENST00000584783 668 ntBASIC33.1■■■□□ 2.89
EFCC1Q9HA90 NRG1-221ENST00000614767 762 ntTSL 5 BASIC33.09■■■□□ 2.89
EFCC1Q9HA90 CAHM-201ENST00000604200 896 ntBASIC33.08■■■□□ 2.89
EFCC1Q9HA90 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
EFCC1Q9HA90 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC33.05■■■□□ 2.88
EFCC1Q9HA90 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
EFCC1Q9HA90 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
EFCC1Q9HA90 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
EFCC1Q9HA90 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.99■■■□□ 2.87
EFCC1Q9HA90 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
EFCC1Q9HA90 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
EFCC1Q9HA90 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32.97■■■□□ 2.87
EFCC1Q9HA90 MIR7108-201ENST00000614319 87 ntBASIC32.94■■■□□ 2.86
EFCC1Q9HA90 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.94■■■□□ 2.86
EFCC1Q9HA90 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
EFCC1Q9HA90 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.93■■■□□ 2.86
EFCC1Q9HA90 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
EFCC1Q9HA90 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
EFCC1Q9HA90 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.9■■■□□ 2.86
EFCC1Q9HA90 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
EFCC1Q9HA90 ABHD17AP4-201ENST00000411545 909 ntBASIC32.89■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms