Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CDH23Q9H251 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CDH23Q9H251 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDH23Q9H251 AL031258.1-201ENST00000623562 325 ntBASIC32.12■■■□□ 2.73
CDH23Q9H251 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.1■■■□□ 2.73
CDH23Q9H251 SUZ12P1-203ENST00000578195 985 ntBASIC32.1■■■□□ 2.73
CDH23Q9H251 RARRES2P7-201ENST00000567349 469 ntBASIC32.08■■■□□ 2.73
CDH23Q9H251 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
CDH23Q9H251 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CDH23Q9H251 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.99■■■□□ 2.71
CDH23Q9H251 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CDH23Q9H251 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CDH23Q9H251 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CDH23Q9H251 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.9■■■□□ 2.7
CDH23Q9H251 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CDH23Q9H251 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CDH23Q9H251 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
CDH23Q9H251 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CDH23Q9H251 AC097358.2-201ENST00000607541 1159 ntBASIC31.83■■■□□ 2.69
CDH23Q9H251 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CDH23Q9H251 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
CDH23Q9H251 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.76■■■□□ 2.68
CDH23Q9H251 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDH23Q9H251 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.74■■■□□ 2.67
CDH23Q9H251 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CDH23Q9H251 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CDH23Q9H251 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDH23Q9H251 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CDH23Q9H251 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
CDH23Q9H251 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CDH23Q9H251 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
CDH23Q9H251 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.61■■■□□ 2.65
CDH23Q9H251 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.59■■■□□ 2.65
CDH23Q9H251 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.59■■■□□ 2.65
CDH23Q9H251 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.56■■■□□ 2.64
CDH23Q9H251 SETD8P1-201ENST00000623146 1180 ntBASIC31.55■■■□□ 2.64
CDH23Q9H251 AL162393.1-201ENST00000437852 946 ntBASIC31.54■■■□□ 2.64
CDH23Q9H251 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDH23Q9H251 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDH23Q9H251 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.48■■■□□ 2.63
CDH23Q9H251 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
CDH23Q9H251 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.41■■■□□ 2.62
CDH23Q9H251 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.39■■■□□ 2.62
CDH23Q9H251 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.37■■■□□ 2.61
CDH23Q9H251 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CDH23Q9H251 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.36■■■□□ 2.61
CDH23Q9H251 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDH23Q9H251 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.34■■■□□ 2.61
CDH23Q9H251 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.34■■■□□ 2.61
CDH23Q9H251 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.34■■■□□ 2.61
CDH23Q9H251 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDH23Q9H251 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
CDH23Q9H251 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.31■■■□□ 2.6
CDH23Q9H251 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.29■■■□□ 2.6
CDH23Q9H251 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDH23Q9H251 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDH23Q9H251 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.22■■■□□ 2.59
CDH23Q9H251 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CDH23Q9H251 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDH23Q9H251 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CDH23Q9H251 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CDH23Q9H251 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDH23Q9H251 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CDH23Q9H251 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.12■■■□□ 2.57
CDH23Q9H251 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDH23Q9H251 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.07■■■□□ 2.56
CDH23Q9H251 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.07■■■□□ 2.56
CDH23Q9H251 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CDH23Q9H251 MIR7108-201ENST00000614319 87 ntBASIC31.05■■■□□ 2.56
CDH23Q9H251 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CDH23Q9H251 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.02■■■□□ 2.56
CDH23Q9H251 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CDH23Q9H251 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CDH23Q9H251 ABHD17AP4-201ENST00000411545 909 ntBASIC31■■■□□ 2.55
CDH23Q9H251 AP006261.1-201ENST00000584783 668 ntBASIC31■■■□□ 2.55
CDH23Q9H251 CAHM-201ENST00000604200 896 ntBASIC30.99■■■□□ 2.55
CDH23Q9H251 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDH23Q9H251 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDH23Q9H251 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDH23Q9H251 HLA-V-202ENST00000446817 847 ntBASIC30.96■■■□□ 2.55
CDH23Q9H251 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDH23Q9H251 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CDH23Q9H251 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.93■■■□□ 2.54
CDH23Q9H251 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CDH23Q9H251 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.92■■■□□ 2.54
CDH23Q9H251 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.91■■■□□ 2.54
CDH23Q9H251 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDH23Q9H251 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.89■■■□□ 2.54
CDH23Q9H251 AL391121.1-201ENST00000607967 1349 ntBASIC30.87■■■□□ 2.53
CDH23Q9H251 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
CDH23Q9H251 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.85■■■□□ 2.53
CDH23Q9H251 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.83■■■□□ 2.53
CDH23Q9H251 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
CDH23Q9H251 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CDH23Q9H251 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.79■■■□□ 2.52
CDH23Q9H251 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CDH23Q9H251 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CDH23Q9H251 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.74■■■□□ 2.51
CDH23Q9H251 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.72■■■□□ 2.51
CDH23Q9H251 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.72■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms