Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
RTFDC1Q9BY42 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC36.2■■■■□ 3.39
RTFDC1Q9BY42 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC36.2■■■■□ 3.39
RTFDC1Q9BY42 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
RTFDC1Q9BY42 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC36.17■■■■□ 3.38
RTFDC1Q9BY42 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
RTFDC1Q9BY42 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC36.16■■■■□ 3.38
RTFDC1Q9BY42 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC36.12■■■■□ 3.37
RTFDC1Q9BY42 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC36.09■■■■□ 3.37
RTFDC1Q9BY42 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC36.08■■■■□ 3.37
RTFDC1Q9BY42 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC36.06■■■■□ 3.36
RTFDC1Q9BY42 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC36.05■■■■□ 3.36
RTFDC1Q9BY42 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC36■■■■□ 3.35
RTFDC1Q9BY42 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC36■■■■□ 3.35
RTFDC1Q9BY42 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC36■■■■□ 3.35
RTFDC1Q9BY42 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC35.97■■■■□ 3.35
RTFDC1Q9BY42 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC35.97■■■■□ 3.35
RTFDC1Q9BY42 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC35.97■■■■□ 3.35
RTFDC1Q9BY42 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC35.93■■■■□ 3.34
RTFDC1Q9BY42 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC35.92■■■■□ 3.34
RTFDC1Q9BY42 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC35.91■■■■□ 3.34
RTFDC1Q9BY42 RARRES2P7-201ENST00000567349 469 ntBASIC35.87■■■■□ 3.33
RTFDC1Q9BY42 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
RTFDC1Q9BY42 EBPL-203ENST00000378270 579 ntTSL 2 BASIC35.76■■■■□ 3.32
RTFDC1Q9BY42 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC35.75■■■■□ 3.31
RTFDC1Q9BY42 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
RTFDC1Q9BY42 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC35.71■■■■□ 3.31
RTFDC1Q9BY42 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC35.7■■■■□ 3.31
RTFDC1Q9BY42 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC35.67■■■■□ 3.3
RTFDC1Q9BY42 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
RTFDC1Q9BY42 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC35.65■■■■□ 3.3
RTFDC1Q9BY42 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC35.64■■■■□ 3.3
RTFDC1Q9BY42 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC35.63■■■■□ 3.29
RTFDC1Q9BY42 AC097358.2-201ENST00000607541 1159 ntBASIC35.63■■■■□ 3.29
RTFDC1Q9BY42 AC136428.2-201ENST00000563187 214 ntBASIC35.61■■■■□ 3.29
RTFDC1Q9BY42 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
RTFDC1Q9BY42 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC35.59■■■■□ 3.29
RTFDC1Q9BY42 SETD8P1-201ENST00000623146 1180 ntBASIC35.54■■■■□ 3.28
RTFDC1Q9BY42 ILK-212ENST00000532063 1617 ntTSL 2 BASIC35.53■■■■□ 3.28
RTFDC1Q9BY42 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
RTFDC1Q9BY42 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC35.49■■■■□ 3.27
RTFDC1Q9BY42 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
RTFDC1Q9BY42 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC35.48■■■■□ 3.27
RTFDC1Q9BY42 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC35.48■■■■□ 3.27
RTFDC1Q9BY42 KLF16-203ENST00000592313 508 ntTSL 3 BASIC35.48■■■■□ 3.27
RTFDC1Q9BY42 SUZ12P1-203ENST00000578195 985 ntBASIC35.47■■■■□ 3.27
RTFDC1Q9BY42 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC35.46■■■■□ 3.27
RTFDC1Q9BY42 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
RTFDC1Q9BY42 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.41■■■■□ 3.26
RTFDC1Q9BY42 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
RTFDC1Q9BY42 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
RTFDC1Q9BY42 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC35.4■■■■□ 3.26
RTFDC1Q9BY42 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC35.38■■■■□ 3.25
RTFDC1Q9BY42 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC35.38■■■■□ 3.25
RTFDC1Q9BY42 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
RTFDC1Q9BY42 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
RTFDC1Q9BY42 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
RTFDC1Q9BY42 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC35.31■■■■□ 3.24
RTFDC1Q9BY42 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC35.3■■■■□ 3.24
RTFDC1Q9BY42 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
RTFDC1Q9BY42 RPS2P35-201ENST00000443417 897 ntBASIC35.22■■■■□ 3.23
RTFDC1Q9BY42 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC35.22■■■■□ 3.23
RTFDC1Q9BY42 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC35.21■■■■□ 3.23
RTFDC1Q9BY42 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC35.21■■■■□ 3.23
RTFDC1Q9BY42 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC35.19■■■■□ 3.22
RTFDC1Q9BY42 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
RTFDC1Q9BY42 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
RTFDC1Q9BY42 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC35.13■■■■□ 3.21
RTFDC1Q9BY42 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC35.13■■■■□ 3.21
RTFDC1Q9BY42 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
RTFDC1Q9BY42 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC35.11■■■■□ 3.21
RTFDC1Q9BY42 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
RTFDC1Q9BY42 AC145285.7-201ENST00000614819 1539 ntBASIC35.06■■■■□ 3.2
RTFDC1Q9BY42 MVK-208ENST00000539696 608 ntTSL 5 BASIC35.06■■■■□ 3.2
RTFDC1Q9BY42 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
RTFDC1Q9BY42 CAHM-201ENST00000604200 896 ntBASIC35.03■■■■□ 3.2
RTFDC1Q9BY42 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC35.02■■■■□ 3.2
RTFDC1Q9BY42 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC34.97■■■■□ 3.19
RTFDC1Q9BY42 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
RTFDC1Q9BY42 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
RTFDC1Q9BY42 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
RTFDC1Q9BY42 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
RTFDC1Q9BY42 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC34.87■■■■□ 3.17
RTFDC1Q9BY42 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
RTFDC1Q9BY42 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
RTFDC1Q9BY42 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC34.85■■■■□ 3.17
RTFDC1Q9BY42 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
RTFDC1Q9BY42 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC34.82■■■■□ 3.16
RTFDC1Q9BY42 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC34.82■■■■□ 3.16
RTFDC1Q9BY42 AL391121.1-201ENST00000607967 1349 ntBASIC34.81■■■■□ 3.16
RTFDC1Q9BY42 AL162393.1-201ENST00000437852 946 ntBASIC34.81■■■■□ 3.16
RTFDC1Q9BY42 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC34.81■■■■□ 3.16
RTFDC1Q9BY42 NRG1-221ENST00000614767 762 ntTSL 5 BASIC34.81■■■■□ 3.16
RTFDC1Q9BY42 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
RTFDC1Q9BY42 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
RTFDC1Q9BY42 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
RTFDC1Q9BY42 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC34.78■■■■□ 3.16
RTFDC1Q9BY42 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
RTFDC1Q9BY42 AP006261.1-201ENST00000584783 668 ntBASIC34.76■■■■□ 3.16
RTFDC1Q9BY42 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms