Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCL19Q99731 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.01■■□□□ 1.59
CCL19Q99731 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.01■■□□□ 1.59
CCL19Q99731 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CCL19Q99731 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CCL19Q99731 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.98■■□□□ 1.59
CCL19Q99731 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CCL19Q99731 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CCL19Q99731 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC24.95■■□□□ 1.58
CCL19Q99731 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.94■■□□□ 1.58
CCL19Q99731 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CCL19Q99731 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.92■■□□□ 1.58
CCL19Q99731 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CCL19Q99731 RARRES2P7-201ENST00000567349 469 ntBASIC24.85■■□□□ 1.57
CCL19Q99731 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
CCL19Q99731 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.84■■□□□ 1.57
CCL19Q99731 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CCL19Q99731 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CCL19Q99731 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
CCL19Q99731 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.8■■□□□ 1.56
CCL19Q99731 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CCL19Q99731 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.76■■□□□ 1.55
CCL19Q99731 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.76■■□□□ 1.55
CCL19Q99731 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.71■■□□□ 1.55
CCL19Q99731 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.71■■□□□ 1.55
CCL19Q99731 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CCL19Q99731 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CCL19Q99731 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.69■■□□□ 1.54
CCL19Q99731 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
CCL19Q99731 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.67■■□□□ 1.54
CCL19Q99731 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.66■■□□□ 1.54
CCL19Q99731 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CCL19Q99731 ILK-212ENST00000532063 1617 ntTSL 2 BASIC24.64■■□□□ 1.54
CCL19Q99731 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.64■■□□□ 1.54
CCL19Q99731 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.64■■□□□ 1.54
CCL19Q99731 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCL19Q99731 AC097358.2-201ENST00000607541 1159 ntBASIC24.61■■□□□ 1.53
CCL19Q99731 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCL19Q99731 SETD8P1-201ENST00000623146 1180 ntBASIC24.57■■□□□ 1.52
CCL19Q99731 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCL19Q99731 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCL19Q99731 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.54■■□□□ 1.52
CCL19Q99731 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.5■■□□□ 1.51
CCL19Q99731 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CCL19Q99731 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCL19Q99731 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CCL19Q99731 AC136428.2-201ENST00000563187 214 ntBASIC24.48■■□□□ 1.51
CCL19Q99731 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.44■■□□□ 1.5
CCL19Q99731 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCL19Q99731 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCL19Q99731 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.39■■□□□ 1.49
CCL19Q99731 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCL19Q99731 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCL19Q99731 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCL19Q99731 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.36■■□□□ 1.49
CCL19Q99731 SUZ12P1-203ENST00000578195 985 ntBASIC24.36■■□□□ 1.49
CCL19Q99731 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.34■■□□□ 1.49
CCL19Q99731 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL19Q99731 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.34■■□□□ 1.49
CCL19Q99731 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.33■■□□□ 1.49
CCL19Q99731 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCL19Q99731 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCL19Q99731 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.31■■□□□ 1.48
CCL19Q99731 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCL19Q99731 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC24.31■■□□□ 1.48
CCL19Q99731 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CCL19Q99731 RPS2P35-201ENST00000443417 897 ntBASIC24.29■■□□□ 1.48
CCL19Q99731 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CCL19Q99731 MVK-208ENST00000539696 608 ntTSL 5 BASIC24.29■■□□□ 1.48
CCL19Q99731 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCL19Q99731 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCL19Q99731 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.26■■□□□ 1.47
CCL19Q99731 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CCL19Q99731 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.24■■□□□ 1.47
CCL19Q99731 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCL19Q99731 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCL19Q99731 AC145285.7-201ENST00000614819 1539 ntBASIC24.16■■□□□ 1.46
CCL19Q99731 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CCL19Q99731 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CCL19Q99731 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC24.15■■□□□ 1.46
CCL19Q99731 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CCL19Q99731 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCL19Q99731 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCL19Q99731 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCL19Q99731 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCL19Q99731 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CCL19Q99731 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.07■■□□□ 1.44
CCL19Q99731 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCL19Q99731 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCL19Q99731 CAHM-201ENST00000604200 896 ntBASIC24.05■■□□□ 1.44
CCL19Q99731 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCL19Q99731 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24■■□□□ 1.43
CCL19Q99731 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CCL19Q99731 AL162393.1-201ENST00000437852 946 ntBASIC23.99■■□□□ 1.43
CCL19Q99731 AP006261.1-201ENST00000584783 668 ntBASIC23.99■■□□□ 1.43
CCL19Q99731 AL391121.1-201ENST00000607967 1349 ntBASIC23.99■■□□□ 1.43
CCL19Q99731 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCL19Q99731 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC23.97■■□□□ 1.43
CCL19Q99731 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CCL19Q99731 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 289.7 ms