Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.89■■■□□ 2.7
YME1L1Q96TA2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.85■■■□□ 2.69
YME1L1Q96TA2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.84■■■□□ 2.69
YME1L1Q96TA2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
YME1L1Q96TA2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.82■■■□□ 2.68
YME1L1Q96TA2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
YME1L1Q96TA2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.79■■■□□ 2.68
YME1L1Q96TA2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
YME1L1Q96TA2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
YME1L1Q96TA2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
YME1L1Q96TA2 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.76■■■□□ 2.68
YME1L1Q96TA2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.76■■■□□ 2.67
YME1L1Q96TA2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
YME1L1Q96TA2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.71■■■□□ 2.67
YME1L1Q96TA2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
YME1L1Q96TA2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.7■■■□□ 2.67
YME1L1Q96TA2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.68■■■□□ 2.66
YME1L1Q96TA2 RARRES2P7-201ENST00000567349 469 ntBASIC31.66■■■□□ 2.66
YME1L1Q96TA2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.63■■■□□ 2.65
YME1L1Q96TA2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
YME1L1Q96TA2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
YME1L1Q96TA2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.56■■■□□ 2.64
YME1L1Q96TA2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
YME1L1Q96TA2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.49■■■□□ 2.63
YME1L1Q96TA2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.46■■■□□ 2.63
YME1L1Q96TA2 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
YME1L1Q96TA2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.43■■■□□ 2.62
YME1L1Q96TA2 AC097358.2-201ENST00000607541 1159 ntBASIC31.42■■■□□ 2.62
YME1L1Q96TA2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
YME1L1Q96TA2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.41■■■□□ 2.62
YME1L1Q96TA2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.41■■■□□ 2.62
YME1L1Q96TA2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.4■■■□□ 2.62
YME1L1Q96TA2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
YME1L1Q96TA2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.37■■■□□ 2.61
YME1L1Q96TA2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
YME1L1Q96TA2 SETD8P1-201ENST00000623146 1180 ntBASIC31.33■■■□□ 2.61
YME1L1Q96TA2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
YME1L1Q96TA2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
YME1L1Q96TA2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
YME1L1Q96TA2 AC136428.2-201ENST00000563187 214 ntBASIC31.27■■■□□ 2.6
YME1L1Q96TA2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.27■■■□□ 2.6
YME1L1Q96TA2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.24■■■□□ 2.59
YME1L1Q96TA2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.23■■■□□ 2.59
YME1L1Q96TA2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
YME1L1Q96TA2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
YME1L1Q96TA2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
YME1L1Q96TA2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.16■■■□□ 2.58
YME1L1Q96TA2 SUZ12P1-203ENST00000578195 985 ntBASIC31.14■■■□□ 2.58
YME1L1Q96TA2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
YME1L1Q96TA2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
YME1L1Q96TA2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
YME1L1Q96TA2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.09■■■□□ 2.57
YME1L1Q96TA2 RPS2P35-201ENST00000443417 897 ntBASIC31.07■■■□□ 2.56
YME1L1Q96TA2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
YME1L1Q96TA2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.06■■■□□ 2.56
YME1L1Q96TA2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.06■■■□□ 2.56
YME1L1Q96TA2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
YME1L1Q96TA2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
YME1L1Q96TA2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.02■■■□□ 2.56
YME1L1Q96TA2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.01■■■□□ 2.55
YME1L1Q96TA2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
YME1L1Q96TA2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.99■■■□□ 2.55
YME1L1Q96TA2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
YME1L1Q96TA2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
YME1L1Q96TA2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
YME1L1Q96TA2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.96■■■□□ 2.55
YME1L1Q96TA2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.96■■■□□ 2.55
YME1L1Q96TA2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
YME1L1Q96TA2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
YME1L1Q96TA2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.88■■■□□ 2.53
YME1L1Q96TA2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.88■■■□□ 2.53
YME1L1Q96TA2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
YME1L1Q96TA2 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.87■■■□□ 2.53
YME1L1Q96TA2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
YME1L1Q96TA2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
YME1L1Q96TA2 AC145285.7-201ENST00000614819 1539 ntBASIC30.78■■■□□ 2.52
YME1L1Q96TA2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
YME1L1Q96TA2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
YME1L1Q96TA2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.74■■■□□ 2.51
YME1L1Q96TA2 CAHM-201ENST00000604200 896 ntBASIC30.73■■■□□ 2.51
YME1L1Q96TA2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
YME1L1Q96TA2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.7■■■□□ 2.51
YME1L1Q96TA2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
YME1L1Q96TA2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
YME1L1Q96TA2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
YME1L1Q96TA2 AL162393.1-201ENST00000437852 946 ntBASIC30.64■■■□□ 2.5
YME1L1Q96TA2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
YME1L1Q96TA2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
YME1L1Q96TA2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
YME1L1Q96TA2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
YME1L1Q96TA2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.61■■■□□ 2.49
YME1L1Q96TA2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.61■■■□□ 2.49
YME1L1Q96TA2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
YME1L1Q96TA2 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
YME1L1Q96TA2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.6■■■□□ 2.49
YME1L1Q96TA2 AP006261.1-201ENST00000584783 668 ntBASIC30.6■■■□□ 2.49
YME1L1Q96TA2 AL391121.1-201ENST00000607967 1349 ntBASIC30.6■■■□□ 2.49
YME1L1Q96TA2 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
YME1L1Q96TA2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
YME1L1Q96TA2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms