Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CHD6Q8TD26 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CHD6Q8TD26 HLA-V-202ENST00000446817 847 ntBASIC28.02■■■□□ 2.08
CHD6Q8TD26 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CHD6Q8TD26 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.92■■■□□ 2.06
CHD6Q8TD26 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.91■■■□□ 2.06
CHD6Q8TD26 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
CHD6Q8TD26 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
CHD6Q8TD26 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.9■■■□□ 2.06
CHD6Q8TD26 MIR7108-201ENST00000614319 87 ntBASIC27.87■■■□□ 2.05
CHD6Q8TD26 AL162393.1-201ENST00000437852 946 ntBASIC27.86■■■□□ 2.05
CHD6Q8TD26 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.85■■■□□ 2.05
CHD6Q8TD26 AL031258.1-201ENST00000623562 325 ntBASIC27.85■■■□□ 2.05
CHD6Q8TD26 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.84■■■□□ 2.05
CHD6Q8TD26 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
CHD6Q8TD26 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.04
CHD6Q8TD26 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD6Q8TD26 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.76■■■□□ 2.04
CHD6Q8TD26 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHD6Q8TD26 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.76■■■□□ 2.03
CHD6Q8TD26 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.73■■■□□ 2.03
CHD6Q8TD26 ABHD17AP4-201ENST00000411545 909 ntBASIC27.7■■■□□ 2.02
CHD6Q8TD26 SETD8P1-201ENST00000623146 1180 ntBASIC27.68■■■□□ 2.02
CHD6Q8TD26 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CHD6Q8TD26 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.64■■■□□ 2.01
CHD6Q8TD26 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.63■■■□□ 2.01
CHD6Q8TD26 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CHD6Q8TD26 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CHD6Q8TD26 AP006261.1-201ENST00000584783 668 ntBASIC27.59■■■□□ 2.01
CHD6Q8TD26 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.57■■■□□ 2
CHD6Q8TD26 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
CHD6Q8TD26 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD6Q8TD26 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CHD6Q8TD26 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
CHD6Q8TD26 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
CHD6Q8TD26 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.49■■□□□ 1.99
CHD6Q8TD26 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.45■■□□□ 1.99
CHD6Q8TD26 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
CHD6Q8TD26 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CHD6Q8TD26 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CHD6Q8TD26 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.37■■□□□ 1.97
CHD6Q8TD26 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CHD6Q8TD26 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CHD6Q8TD26 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.34■■□□□ 1.97
CHD6Q8TD26 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CHD6Q8TD26 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.32■■□□□ 1.96
CHD6Q8TD26 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD6Q8TD26 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD6Q8TD26 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.3■■□□□ 1.96
CHD6Q8TD26 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CHD6Q8TD26 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
CHD6Q8TD26 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.27■■□□□ 1.96
CHD6Q8TD26 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.26■■□□□ 1.95
CHD6Q8TD26 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.26■■□□□ 1.95
CHD6Q8TD26 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD6Q8TD26 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.25■■□□□ 1.95
CHD6Q8TD26 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CHD6Q8TD26 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.22■■□□□ 1.95
CHD6Q8TD26 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.22■■□□□ 1.95
CHD6Q8TD26 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CHD6Q8TD26 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.2■■□□□ 1.95
CHD6Q8TD26 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.2■■□□□ 1.94
CHD6Q8TD26 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CHD6Q8TD26 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.19■■□□□ 1.94
CHD6Q8TD26 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CHD6Q8TD26 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
CHD6Q8TD26 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
CHD6Q8TD26 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.15■■□□□ 1.94
CHD6Q8TD26 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
CHD6Q8TD26 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.14■■□□□ 1.93
CHD6Q8TD26 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD6Q8TD26 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CHD6Q8TD26 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CHD6Q8TD26 MIR4449-201ENST00000578365 66 ntBASIC27.12■■□□□ 1.93
CHD6Q8TD26 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.11■■□□□ 1.93
CHD6Q8TD26 CAHM-201ENST00000604200 896 ntBASIC27.11■■□□□ 1.93
CHD6Q8TD26 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.11■■□□□ 1.93
CHD6Q8TD26 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.1■■□□□ 1.93
CHD6Q8TD26 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHD6Q8TD26 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.08■■□□□ 1.93
CHD6Q8TD26 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.08■■□□□ 1.93
CHD6Q8TD26 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHD6Q8TD26 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.07■■□□□ 1.92
CHD6Q8TD26 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.06■■□□□ 1.92
CHD6Q8TD26 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.02■■□□□ 1.92
CHD6Q8TD26 MIR3665-201ENST00000578708 105 ntBASIC27.02■■□□□ 1.92
CHD6Q8TD26 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27■■□□□ 1.91
CHD6Q8TD26 AL391121.1-201ENST00000607967 1349 ntBASIC26.99■■□□□ 1.91
CHD6Q8TD26 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.97■■□□□ 1.91
CHD6Q8TD26 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
CHD6Q8TD26 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.96■■□□□ 1.91
CHD6Q8TD26 HSD17B1P1-201ENST00000590052 955 ntBASIC26.96■■□□□ 1.91
CHD6Q8TD26 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.96■■□□□ 1.91
CHD6Q8TD26 AC087741.3-201ENST00000624270 1347 ntBASIC26.94■■□□□ 1.9
CHD6Q8TD26 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.89■■□□□ 1.9
CHD6Q8TD26 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CHD6Q8TD26 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
CHD6Q8TD26 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CHD6Q8TD26 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
CHD6Q8TD26 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms