Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.26■■■□□ 2.11
ZFHX4Q86UP3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.26■■■□□ 2.11
ZFHX4Q86UP3 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZFHX4Q86UP3 RARRES2P7-201ENST00000567349 469 ntBASIC28.22■■■□□ 2.11
ZFHX4Q86UP3 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ZFHX4Q86UP3 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ZFHX4Q86UP3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ZFHX4Q86UP3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
ZFHX4Q86UP3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ZFHX4Q86UP3 AC097358.2-201ENST00000607541 1159 ntBASIC28.09■■■□□ 2.09
ZFHX4Q86UP3 AL031258.1-201ENST00000623562 325 ntBASIC28.09■■■□□ 2.09
ZFHX4Q86UP3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
ZFHX4Q86UP3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
ZFHX4Q86UP3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.05■■■□□ 2.08
ZFHX4Q86UP3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC28.05■■■□□ 2.08
ZFHX4Q86UP3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
ZFHX4Q86UP3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.01■■■□□ 2.08
ZFHX4Q86UP3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
ZFHX4Q86UP3 AL162393.1-201ENST00000437852 946 ntBASIC27.98■■■□□ 2.07
ZFHX4Q86UP3 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
ZFHX4Q86UP3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ZFHX4Q86UP3 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ZFHX4Q86UP3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.94■■■□□ 2.06
ZFHX4Q86UP3 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
ZFHX4Q86UP3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC27.93■■■□□ 2.06
ZFHX4Q86UP3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.91■■■□□ 2.06
ZFHX4Q86UP3 MIR7108-201ENST00000614319 87 ntBASIC27.9■■■□□ 2.06
ZFHX4Q86UP3 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ZFHX4Q86UP3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ZFHX4Q86UP3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ZFHX4Q86UP3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.86■■■□□ 2.05
ZFHX4Q86UP3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.86■■■□□ 2.05
ZFHX4Q86UP3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
ZFHX4Q86UP3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ZFHX4Q86UP3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ZFHX4Q86UP3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.84■■■□□ 2.05
ZFHX4Q86UP3 HLA-V-202ENST00000446817 847 ntBASIC27.81■■■□□ 2.04
ZFHX4Q86UP3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
ZFHX4Q86UP3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ZFHX4Q86UP3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.79■■■□□ 2.04
ZFHX4Q86UP3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.75■■■□□ 2.03
ZFHX4Q86UP3 ABHD17AP4-201ENST00000411545 909 ntBASIC27.73■■■□□ 2.03
ZFHX4Q86UP3 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.7■■■□□ 2.03
ZFHX4Q86UP3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.69■■■□□ 2.02
ZFHX4Q86UP3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.68■■■□□ 2.02
ZFHX4Q86UP3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
ZFHX4Q86UP3 SETD8P1-201ENST00000623146 1180 ntBASIC27.67■■■□□ 2.02
ZFHX4Q86UP3 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
ZFHX4Q86UP3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
ZFHX4Q86UP3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
ZFHX4Q86UP3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
ZFHX4Q86UP3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ZFHX4Q86UP3 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
ZFHX4Q86UP3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.57■■■□□ 2
ZFHX4Q86UP3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.54■■■□□ 2
ZFHX4Q86UP3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
ZFHX4Q86UP3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.49■■□□□ 1.99
ZFHX4Q86UP3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.49■■□□□ 1.99
ZFHX4Q86UP3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
ZFHX4Q86UP3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.47■■□□□ 1.99
ZFHX4Q86UP3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.47■■□□□ 1.99
ZFHX4Q86UP3 AP006261.1-201ENST00000584783 668 ntBASIC27.44■■□□□ 1.98
ZFHX4Q86UP3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.42■■□□□ 1.98
ZFHX4Q86UP3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.41■■□□□ 1.98
ZFHX4Q86UP3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ZFHX4Q86UP3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC27.37■■□□□ 1.97
ZFHX4Q86UP3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZFHX4Q86UP3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.35■■□□□ 1.97
ZFHX4Q86UP3 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.34■■□□□ 1.97
ZFHX4Q86UP3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZFHX4Q86UP3 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
ZFHX4Q86UP3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.31■■□□□ 1.96
ZFHX4Q86UP3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.31■■□□□ 1.96
ZFHX4Q86UP3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.31■■□□□ 1.96
ZFHX4Q86UP3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.3■■□□□ 1.96
ZFHX4Q86UP3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.3■■□□□ 1.96
ZFHX4Q86UP3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.3■■□□□ 1.96
ZFHX4Q86UP3 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
ZFHX4Q86UP3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
ZFHX4Q86UP3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.27■■□□□ 1.96
ZFHX4Q86UP3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.26■■□□□ 1.95
ZFHX4Q86UP3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ZFHX4Q86UP3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
ZFHX4Q86UP3 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZFHX4Q86UP3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
ZFHX4Q86UP3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.22■■□□□ 1.95
ZFHX4Q86UP3 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
ZFHX4Q86UP3 CAHM-201ENST00000604200 896 ntBASIC27.2■■□□□ 1.94
ZFHX4Q86UP3 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
ZFHX4Q86UP3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.19■■□□□ 1.94
ZFHX4Q86UP3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
ZFHX4Q86UP3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.18■■□□□ 1.94
ZFHX4Q86UP3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
ZFHX4Q86UP3 MIR4449-201ENST00000578365 66 ntBASIC27.15■■□□□ 1.94
ZFHX4Q86UP3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZFHX4Q86UP3 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ZFHX4Q86UP3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.13■■□□□ 1.93
ZFHX4Q86UP3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.09■■□□□ 1.93
ZFHX4Q86UP3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.07■■□□□ 1.92
ZFHX4Q86UP3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms